RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 JAK2O60674 1132 aa21.77■■□□□ 1.08
USP39-201ENST00000323701 MCM5P33992 734 aa21.77■■□□□ 1.08
USP39-201ENST00000323701 MPNDQ8N594 471 aa21.77■■□□□ 1.08
USP39-201ENST00000323701 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
USP39-201ENST00000323701 BAZ2AQ9UIF9 1905 aaKnown RBP21.77■■□□□ 1.08
USP39-201ENST00000323701 LDHBP07195 334 aaKnown RBP21.77■■□□□ 1.07
USP39-201ENST00000323701 RALYLQ86SE5 291 aaKnown RBP21.77■■□□□ 1.07
USP39-201ENST00000323701 DZIP1Q86YF9 867 aaKnown RBP21.77■■□□□ 1.07
USP39-201ENST00000323701 GBP4Q96PP9 640 aa21.77■■□□□ 1.07
USP39-201ENST00000323701 SENP2Q9HC62 589 aa21.77■■□□□ 1.07
USP39-201ENST00000323701 NCOA5Q9HCD5 579 aaKnown RBP21.77■■□□□ 1.07
USP39-201ENST00000323701 BRPF3Q9ULD4 1205 aa21.77■■□□□ 1.07
USP39-201ENST00000323701 CCDC88AQ3V6T2 1871 aa21.76■■□□□ 1.07
USP39-201ENST00000323701 H0YIN7 160 aa21.76■■□□□ 1.07
USP39-201ENST00000323701 NACAP1Q9BZK3 213 aa21.76■■□□□ 1.07
USP39-201ENST00000323701 PFKFB2O60825 505 aa21.75■■□□□ 1.07
USP39-201ENST00000323701 PDIA3P30101 505 aaKnown RBP21.75■■□□□ 1.07
USP39-201ENST00000323701 CCT2P78371 535 aaKnown RBP21.75■■□□□ 1.07
USP39-201ENST00000323701 DPP8Q6V1X1 898 aaPredicted RBP21.75■■□□□ 1.07
USP39-201ENST00000323701 FBXL16Q8N461 479 aa21.75■■□□□ 1.07
USP39-201ENST00000323701 MAST2Q6P0Q8 1798 aa21.75■■□□□ 1.07
USP39-201ENST00000323701 PPFIA3O75145 1194 aa21.75■■□□□ 1.07
USP39-201ENST00000323701 UTRNP46939 3433 aa21.75■■□□□ 1.07
USP39-201ENST00000323701 CTDNEP1O95476 244 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 FOXD4L6Q3SYB3 417 aaPredicted RBP21.74■■□□□ 1.07
USP39-201ENST00000323701 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 SPTY2D1Q68D10 685 aaPredicted RBP21.74■■□□□ 1.07
USP39-201ENST00000323701 FOXD4L3Q6VB84 417 aaPredicted RBP21.74■■□□□ 1.07
USP39-201ENST00000323701 RAB11FIP4Q86YS3 637 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 TIAM2Q8IVF5 1701 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 MINDY4BA8MYZ0 360 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 STX6O43752 255 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 PPARAQ07869 468 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 DOK7Q18PE1 504 aa21.74■■□□□ 1.07
USP39-201ENST00000323701 NAP1L2Q9ULW6 460 aaPredicted RBP21.74■■□□□ 1.07
USP39-201ENST00000323701 KDM4AO75164 1064 aa21.73■■□□□ 1.07
USP39-201ENST00000323701 EVCP57679 992 aa21.73■■□□□ 1.07
USP39-201ENST00000323701 TRDNQ13061 729 aa21.73■■□□□ 1.07
USP39-201ENST00000323701 MCTP1Q6DN14 999 aa21.73■■□□□ 1.07
USP39-201ENST00000323701 STYK1Q6J9G0 422 aa21.73■■□□□ 1.07
USP39-201ENST00000323701 ZSWIM5Q9P217 1185 aa21.73■■□□□ 1.07
USP39-201ENST00000323701 GTF2IP78347 998 aa21.72■■□□□ 1.07
USP39-201ENST00000323701 MFSD14BQ5SR56 506 aa21.72■■□□□ 1.07
USP39-201ENST00000323701 HPS5Q9UPZ3 1129 aa21.72■■□□□ 1.07
USP39-201ENST00000323701 CTR9Q6PD62 1173 aa21.72■■□□□ 1.07
USP39-201ENST00000323701 STAG1Q8WVM7 1258 aa21.72■■□□□ 1.07
USP39-201ENST00000323701 MXD3Q9BW11 206 aa21.72■■□□□ 1.07
USP39-201ENST00000323701 DCP1AQ9NPI6 582 aaPredicted RBP21.72■■□□□ 1.07
USP39-201ENST00000323701 MTMR6Q9Y217 621 aa21.72■■□□□ 1.07
USP39-201ENST00000323701 DDX11L8A8MPP1 907 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 MFSD6Q6ZSS7 791 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 DDX11Q96FC9 970 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 ZNF274Q96GC6 653 aaPredicted RBP21.71■■□□□ 1.07
USP39-201ENST00000323701 KCNQ5Q9NR82 932 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 WDR33Q9C0J8 1336 aaKnown RBP21.71■■□□□ 1.07
USP39-201ENST00000323701 USP17L12C9JPN9 530 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 USP17L21D6R901 530 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 ZSCAN22P10073 491 aaPredicted RBP21.71■■□□□ 1.07
USP39-201ENST00000323701 RRP12Q5JTH9 1297 aaKnown RBP21.71■■□□□ 1.07
USP39-201ENST00000323701 IGDCC4Q8TDY8 1250 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 SH3RF3Q8TEJ3 882 aaPredicted RBP21.71■■□□□ 1.07
USP39-201ENST00000323701 C7orf43Q8WVR3 580 aa21.71■■□□□ 1.07
USP39-201ENST00000323701 ZC3H12CQ9C0D7 883 aaKnown RBP21.71■■□□□ 1.07
USP39-201ENST00000323701 KLF18A0A0U1RQI7 1052 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 SH2B2O14492 632 aaPredicted RBP21.7■■□□□ 1.06
USP39-201ENST00000323701 TRAK2O60296 914 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 CYP2D6P10635 497 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 CERS5Q8N5B7 392 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 NSUN7Q8NE18 718 aaKnown RBP21.7■■□□□ 1.06
USP39-201ENST00000323701 COA1Q9GZY4 146 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 WDR19Q8NEZ3 1342 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 KIAA1551Q9HCM1 1747 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 SLC4A8Q2Y0W8 1093 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 ZKSCAN3Q9BRR0 538 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 RTFDC1Q9BY42 306 aaPredicted RBP21.7■■□□□ 1.06
USP39-201ENST00000323701 ANAPC4Q9UJX5 808 aa21.7■■□□□ 1.06
USP39-201ENST00000323701 FAM205AQ6ZU69 1335 aa21.69■■□□□ 1.06
USP39-201ENST00000323701 CRNKL1Q9BZJ0 848 aaKnown RBP21.69■■□□□ 1.06
USP39-201ENST00000323701 TOMM22Q9NS69 142 aa21.69■■□□□ 1.06
USP39-201ENST00000323701 ANGEL1Q9UNK9 670 aaKnown RBP21.69■■□□□ 1.06
USP39-201ENST00000323701 LARP1BQ659C4 914 aaKnown RBP21.68■■□□□ 1.06
USP39-201ENST00000323701 SMARCC2Q8TAQ2 1214 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 LY9Q9HBG7 655 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 MKRN1Q9UHC7 482 aaKnown RBP21.68■■□□□ 1.06
USP39-201ENST00000323701 C10orf71Q711Q0 1435 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 SRCAPQ6ZRS2 3230 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 VPS37CA5D8V6 355 aaPredicted RBP21.68■■□□□ 1.06
USP39-201ENST00000323701 PRDM1O75626 825 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 CDC37L1Q7L3B6 337 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 FBXW7Q969H0 707 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 DBNDD1Q9H9R9 158 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 MROH7-TTC4A0A0A0MT08 1334 aa21.68■■□□□ 1.06
USP39-201ENST00000323701 SNED1Q8TER0 1413 aa21.67■■□□□ 1.06
USP39-201ENST00000323701 GOLGA8BA8MQT2 603 aa21.67■■□□□ 1.06
USP39-201ENST00000323701 USP17L8P0C7I0 530 aa21.67■■□□□ 1.06
USP39-201ENST00000323701 RXRAP19793 462 aa21.67■■□□□ 1.06
USP39-201ENST00000323701 LMBRD1Q9NUN5 540 aa21.67■■□□□ 1.06
USP39-201ENST00000323701 GIMAP6Q6P9H5 292 aa21.67■■□□□ 1.06
USP39-201ENST00000323701 PTPDC1A2A3K4 754 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms