RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 MAP3K9P80192 1104 aa20.44■□□□□ 0.86
LINC00476-201ENST00000321517 VGLL4Q14135 290 aa20.44■□□□□ 0.86
LINC00476-201ENST00000321517 POLA2Q14181 598 aa20.44■□□□□ 0.86
LINC00476-201ENST00000321517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.44■□□□□ 0.86
LINC00476-201ENST00000321517 SSH3Q8TE77 659 aa20.44■□□□□ 0.86
LINC00476-201ENST00000321517 TEKT1Q969V4 418 aa20.44■□□□□ 0.86
LINC00476-201ENST00000321517 ZDHHC15Q96MV8 337 aa20.44■□□□□ 0.86
LINC00476-201ENST00000321517 OTOP1Q7RTM1 612 aa20.43■□□□□ 0.86
LINC00476-201ENST00000321517 BRI3BPQ8WY22 251 aa20.43■□□□□ 0.86
LINC00476-201ENST00000321517 SIL1Q9H173 461 aa20.43■□□□□ 0.86
LINC00476-201ENST00000321517 COPRSQ9NQ92 184 aa20.43■□□□□ 0.86
LINC00476-201ENST00000321517 TNNI2P48788 182 aa20.42■□□□□ 0.86
LINC00476-201ENST00000321517 HSP90AB4PQ58FF6 505 aa20.42■□□□□ 0.86
LINC00476-201ENST00000321517 LPIN2Q92539 896 aa20.42■□□□□ 0.86
LINC00476-201ENST00000321517 PA2G4Q9UQ80 394 aaKnown RBP20.42■□□□□ 0.86
LINC00476-201ENST00000321517 TRIM17Q9Y577 477 aa20.42■□□□□ 0.86
LINC00476-201ENST00000321517 HHIPL2Q6UWX4 724 aa20.41■□□□□ 0.86
LINC00476-201ENST00000321517 CD99L2Q8TCZ2 262 aa20.41■□□□□ 0.86
LINC00476-201ENST00000321517 C1orf115Q9H7X2 142 aa20.41■□□□□ 0.86
LINC00476-201ENST00000321517 CIAO1O76071 339 aa20.4■□□□□ 0.86
LINC00476-201ENST00000321517 SLC5A1P13866 664 aa20.4■□□□□ 0.86
LINC00476-201ENST00000321517 ZKSCAN4Q969J2 545 aaPredicted RBP20.4■□□□□ 0.86
LINC00476-201ENST00000321517 SUGT1Q9Y2Z0 365 aa20.4■□□□□ 0.86
LINC00476-201ENST00000321517 SNCAIPQ9Y6H5 919 aa20.4■□□□□ 0.86
LINC00476-201ENST00000321517 PNMA6EA0A0J9YXQ4 647 aa20.39■□□□□ 0.85
LINC00476-201ENST00000321517 SLC34A2O95436 690 aa20.39■□□□□ 0.85
LINC00476-201ENST00000321517 DIXDC1Q155Q3 683 aa20.39■□□□□ 0.85
LINC00476-201ENST00000321517 FAM83AQ86UY5 434 aa20.39■□□□□ 0.85
LINC00476-201ENST00000321517 FAM43AQ8N2R8 423 aa20.39■□□□□ 0.85
LINC00476-201ENST00000321517 OTUD5Q96G74 571 aa20.39■□□□□ 0.85
LINC00476-201ENST00000321517 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
LINC00476-201ENST00000321517 CENPFP49454 3210 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 CCL15-CCL14A0A0B4J2E2 113 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 PRDX5P30044 214 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 HDAC1Q13547 482 aaPredicted RBP20.38■□□□□ 0.85
LINC00476-201ENST00000321517 CCL15Q16663 113 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 FKBP1CQ5VVH2 108 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 OTUD7BQ6GQQ9 843 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 MIGA2Q7L4E1 593 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 WDR66Q8TBY9 1149 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
LINC00476-201ENST00000321517 DAGLAQ9Y4D2 1042 aa20.38■□□□□ 0.85
LINC00476-201ENST00000321517 ADORA1P30542 326 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 IL15P40933 162 aaPredicted RBP20.37■□□□□ 0.85
LINC00476-201ENST00000321517 PHKA1P46020 1223 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
LINC00476-201ENST00000321517 SP3Q02447 781 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 ATP2B3Q16720 1220 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 CDC42EP5Q6NZY7 148 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 ERC1Q8IUD2 1116 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 CEP126Q9P2H0 1117 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 PTPN22Q9Y2R2 807 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 MYH13Q9UKX3 1938 aa20.37■□□□□ 0.85
LINC00476-201ENST00000321517 KIAA0100Q14667 2235 aaKnown RBP20.37■□□□□ 0.85
LINC00476-201ENST00000321517 SPDYE5A6NIY4 337 aa20.36■□□□□ 0.85
LINC00476-201ENST00000321517 GTF2A2P52657 109 aa20.36■□□□□ 0.85
LINC00476-201ENST00000321517 NFIAQ12857 509 aa20.36■□□□□ 0.85
LINC00476-201ENST00000321517 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
LINC00476-201ENST00000321517 ERO1AQ96HE7 468 aa20.36■□□□□ 0.85
LINC00476-201ENST00000321517 WRNIP1Q96S55 665 aa20.36■□□□□ 0.85
LINC00476-201ENST00000321517 PCDHB15Q9Y5E8 787 aa20.36■□□□□ 0.85
LINC00476-201ENST00000321517 CSADQ9Y600 493 aa20.36■□□□□ 0.85
LINC00476-201ENST00000321517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.36■□□□□ 0.85
LINC00476-201ENST00000321517 MAST3O60307 1309 aa20.35■□□□□ 0.85
LINC00476-201ENST00000321517 POTEFA5A3E0 1075 aa20.35■□□□□ 0.85
LINC00476-201ENST00000321517 RAB11FIP3O75154 756 aa20.35■□□□□ 0.85
LINC00476-201ENST00000321517 INPP5BP32019 993 aa20.35■□□□□ 0.85
LINC00476-201ENST00000321517 ZFPM1Q8IX07 1006 aa20.35■□□□□ 0.85
LINC00476-201ENST00000321517 SIRT2Q8IXJ6 389 aa20.35■□□□□ 0.85
LINC00476-201ENST00000321517 TMOD2Q9NZR1 351 aa20.35■□□□□ 0.85
LINC00476-201ENST00000321517 IRF6O14896 467 aa20.34■□□□□ 0.85
LINC00476-201ENST00000321517 TIMM10P62072 90 aa20.34■□□□□ 0.85
LINC00476-201ENST00000321517 TCP10Q12799 353 aa20.34■□□□□ 0.85
LINC00476-201ENST00000321517 TAF1CQ15572 869 aaPredicted RBP20.34■□□□□ 0.85
LINC00476-201ENST00000321517 ERO1BQ86YB8 467 aa20.34■□□□□ 0.85
LINC00476-201ENST00000321517 FAM151AQ8WW52 585 aa20.34■□□□□ 0.85
LINC00476-201ENST00000321517 EFCC1Q9HA90 598 aa20.34■□□□□ 0.85
LINC00476-201ENST00000321517 FAM198AQ9UFP1 575 aa20.34■□□□□ 0.85
LINC00476-201ENST00000321517 BTBD19C9JJ37 291 aa20.33■□□□□ 0.85
LINC00476-201ENST00000321517 SURF6O75683 361 aaKnown RBP20.33■□□□□ 0.85
LINC00476-201ENST00000321517 GCC1Q96CN9 775 aa20.33■□□□□ 0.85
LINC00476-201ENST00000321517 DCTPP1Q9H773 170 aa20.33■□□□□ 0.85
LINC00476-201ENST00000321517 MKI67P46013 3256 aaKnown RBP20.33■□□□□ 0.85
LINC00476-201ENST00000321517 CCDC102BQ68D86 513 aa20.32■□□□□ 0.84
LINC00476-201ENST00000321517 ZFYVE28Q9HCC9 887 aa20.32■□□□□ 0.84
LINC00476-201ENST00000321517 USP40Q9NVE5 1235 aa20.32■□□□□ 0.84
LINC00476-201ENST00000321517 ZNF112Q9UJU3 913 aa20.32■□□□□ 0.84
LINC00476-201ENST00000321517 RPAP1Q9BWH6 1393 aaPredicted RBP20.32■□□□□ 0.84
LINC00476-201ENST00000321517 LDHBP07195 334 aaKnown RBP20.31■□□□□ 0.84
LINC00476-201ENST00000321517 ZNF341Q9BYN7 854 aa20.31■□□□□ 0.84
LINC00476-201ENST00000321517 ARHGAP39Q9C0H5 1083 aa20.31■□□□□ 0.84
LINC00476-201ENST00000321517 AKAP2Q9Y2D5 859 aa20.31■□□□□ 0.84
LINC00476-201ENST00000321517 SALL1Q9NSC2 1324 aa20.3■□□□□ 0.84
LINC00476-201ENST00000321517 ZSWIM8A7E2V4 1837 aa20.3■□□□□ 0.84
LINC00476-201ENST00000321517 AK9Q5TCS8 1911 aa20.3■□□□□ 0.84
LINC00476-201ENST00000321517 SLURP2P0DP57 97 aa20.3■□□□□ 0.84
LINC00476-201ENST00000321517 CETPP11597 493 aa20.3■□□□□ 0.84
LINC00476-201ENST00000321517 PPIL2Q13356 520 aa20.3■□□□□ 0.84
LINC00476-201ENST00000321517 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
LINC00476-201ENST00000321517 KIF1BPQ96EK5 621 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms