RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 TMEM87BQ96K49 555 aa19.97■□□□□ 0.79
SSR4-201ENST00000320857 TMEM63CQ9P1W3 806 aa19.97■□□□□ 0.79
SSR4-201ENST00000320857 TMED8Q6PL24 325 aaPredicted RBP19.96■□□□□ 0.79
SSR4-201ENST00000320857 FERMT3Q86UX7 667 aa19.96■□□□□ 0.79
SSR4-201ENST00000320857 NLGN1Q8N2Q7 840 aa19.96■□□□□ 0.79
SSR4-201ENST00000320857 MIGA1Q8NAN2 632 aa19.96■□□□□ 0.79
SSR4-201ENST00000320857 RPGRQ92834 1020 aaKnown RBP19.96■□□□□ 0.79
SSR4-201ENST00000320857 KRT23Q9C075 422 aa19.96■□□□□ 0.79
SSR4-201ENST00000320857 ZSCAN16Q9H4T2 348 aaPredicted RBP19.96■□□□□ 0.79
SSR4-201ENST00000320857 GPHNQ9NQX3 736 aaPredicted RBP19.96■□□□□ 0.79
SSR4-201ENST00000320857 ANGEL1Q9UNK9 670 aaKnown RBP19.96■□□□□ 0.79
SSR4-201ENST00000320857 LEMD3Q9Y2U8 911 aa19.96■□□□□ 0.79
SSR4-201ENST00000320857 SALL1Q9NSC2 1324 aa19.95■□□□□ 0.78
SSR4-201ENST00000320857 GOLGA8BA8MQT2 603 aa19.95■□□□□ 0.78
SSR4-201ENST00000320857 NCOA5Q9HCD5 579 aaKnown RBP19.95■□□□□ 0.78
SSR4-201ENST00000320857 KLRG2A4D1S0 409 aaPredicted RBP19.94■□□□□ 0.78
SSR4-201ENST00000320857 B4E1Z4 1266 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 PRKAB2O43741 272 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 KLRK1P26718 216 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 AKNAD1Q5T1N1 836 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 RBM17Q96I25 401 aaKnown RBP19.94■□□□□ 0.78
SSR4-201ENST00000320857 BRPF3Q9ULD4 1205 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 IRS2Q9Y4H2 1338 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 SH2B2O14492 632 aaPredicted RBP19.94■□□□□ 0.78
SSR4-201ENST00000320857 IGSF3O75054 1194 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 HOXA10P31260 410 aaPredicted RBP19.94■□□□□ 0.78
SSR4-201ENST00000320857 MFSD6Q6ZSS7 791 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 CYB5R4Q7L1T6 521 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 SCAND2PQ9GZW5 306 aaPredicted RBP19.94■□□□□ 0.78
SSR4-201ENST00000320857 RNF41Q9H4P4 317 aaPredicted RBP19.94■□□□□ 0.78
SSR4-201ENST00000320857 ANKIB1Q9P2G1 1089 aa19.94■□□□□ 0.78
SSR4-201ENST00000320857 TIAM2Q8IVF5 1701 aa19.93■□□□□ 0.78
SSR4-201ENST00000320857 NEDD4P46934 1319 aa19.93■□□□□ 0.78
SSR4-201ENST00000320857 XDHP47989 1333 aa19.93■□□□□ 0.78
SSR4-201ENST00000320857 RESTQ13127 1097 aa19.93■□□□□ 0.78
SSR4-201ENST00000320857 STAG1Q8WVM7 1258 aa19.93■□□□□ 0.78
SSR4-201ENST00000320857 NRXN2Q9P2S2 1712 aa19.93■□□□□ 0.78
SSR4-201ENST00000320857 ELP1O95163 1332 aa19.92■□□□□ 0.78
SSR4-201ENST00000320857 CTDSPL2Q05D32 466 aa19.92■□□□□ 0.78
SSR4-201ENST00000320857 ADGRA1Q86SQ6 560 aa19.92■□□□□ 0.78
SSR4-201ENST00000320857 RIOK1Q9BRS2 568 aaKnown RBP19.92■□□□□ 0.78
SSR4-201ENST00000320857 HPS5Q9UPZ3 1129 aa19.92■□□□□ 0.78
SSR4-201ENST00000320857 CPLX1O14810 134 aa19.91■□□□□ 0.78
SSR4-201ENST00000320857 BBOX1O75936 387 aa19.91■□□□□ 0.78
SSR4-201ENST00000320857 SPTY2D1Q68D10 685 aaPredicted RBP19.91■□□□□ 0.78
SSR4-201ENST00000320857 MSL1Q68DK7 614 aa19.91■□□□□ 0.78
SSR4-201ENST00000320857 LRSAM1Q6UWE0 723 aa19.91■□□□□ 0.78
SSR4-201ENST00000320857 CRAMP1Q96RY5 1269 aa19.91■□□□□ 0.78
SSR4-201ENST00000320857 CHAF1AQ13111 956 aaPredicted RBP19.91■□□□□ 0.78
SSR4-201ENST00000320857 NSUN4Q96CB9 384 aaKnown RBP19.91■□□□□ 0.78
SSR4-201ENST00000320857 MTA3Q9BTC8 594 aa19.91■□□□□ 0.78
SSR4-201ENST00000320857 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 SYCE3A1L190 88 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 LETM1O95202 739 aaPredicted RBP19.9■□□□□ 0.78
SSR4-201ENST00000320857 LIFRP42702 1097 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 PPARAQ07869 468 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 TMEM67Q5HYA8 995 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 CCDC183Q5T5S1 534 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 GIMAP6Q6P9H5 292 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 C15orf52Q6ZUT6 534 aaKnown RBP19.9■□□□□ 0.78
SSR4-201ENST00000320857 SGMS1Q86VZ5 419 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 IGDCC4Q8TDY8 1250 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 BRIP1Q9BX63 1249 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 ANAPC4Q9UJX5 808 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 CACNA1SQ13698 1873 aa19.9■□□□□ 0.78
SSR4-201ENST00000320857 KDM4AO75164 1064 aa19.89■□□□□ 0.77
SSR4-201ENST00000320857 CDKL5O76039 1030 aa19.89■□□□□ 0.77
SSR4-201ENST00000320857 ZBTB7AO95365 584 aa19.89■□□□□ 0.77
SSR4-201ENST00000320857 SART3Q15020 963 aaKnown RBP19.89■□□□□ 0.77
SSR4-201ENST00000320857 CPLX2Q6PUV4 134 aaKnown RBP19.89■□□□□ 0.77
SSR4-201ENST00000320857 NFXL1Q6ZNB6 911 aa19.89■□□□□ 0.77
SSR4-201ENST00000320857 ZNF804AQ7Z570 1209 aa19.89■□□□□ 0.77
SSR4-201ENST00000320857 TCHHQ07283 1943 aa19.89■□□□□ 0.77
SSR4-201ENST00000320857 ANKRD31Q8N7Z5 1873 aa19.89■□□□□ 0.77
SSR4-201ENST00000320857 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 IFIT3O14879 490 aaKnown RBP19.88■□□□□ 0.77
SSR4-201ENST00000320857 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.773e-6■■■■□ 21.8
SSR4-201ENST00000320857 MECOMQ03112 1051 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 FAM173BQ6P4H8 233 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 TTC6Q86TZ1 520 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 TXNRD3Q86VQ6 643 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 KLHL34Q8N239 644 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 RGS22Q8NE09 1264 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 WDR66Q8TBY9 1149 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 SDR42E1Q8WUS8 393 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 SPATA32Q96LK8 384 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 PANK2Q9BZ23 570 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 ZSWIM5Q9P217 1185 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 CFAP45Q9UL16 551 aa19.88■□□□□ 0.77
SSR4-201ENST00000320857 FDPSP14324 419 aaKnown RBP19.87■□□□□ 0.77
SSR4-201ENST00000320857 ATP2B4P23634 1241 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 DYNLL1P63167 89 aaKnown RBP19.87■□□□□ 0.77
SSR4-201ENST00000320857 ATL3Q6DD88 541 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 TMC4Q7Z404 712 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 LY9Q9HBG7 655 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 TOMM22Q9NS69 142 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
SSR4-201ENST00000320857 ZBTB43O43298 467 aa19.87■□□□□ 0.77
SSR4-201ENST00000320857 NASPP49321 788 aaPredicted RBP19.87■□□□□ 0.77
SSR4-201ENST00000320857 GPSM2P81274 684 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms