RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 AATFQ9NY61 560 aaKnown RBP eCLIP37.23■■■■□ 3.55
NECTIN3-201ENST00000319792 CDK5RAP2Q96SN8 1893 aa37.23■■■■□ 3.55
NECTIN3-201ENST00000319792 BAZ2AQ9UIF9 1905 aaKnown RBP37.22■■■■□ 3.55
NECTIN3-201ENST00000319792 HMGB1P09429 215 aaKnown RBP37.22■■■■□ 3.55
NECTIN3-201ENST00000319792 DIXDC1Q155Q3 683 aa37.22■■■■□ 3.55
NECTIN3-201ENST00000319792 STRIP1Q5VSL9 837 aa37.22■■■■□ 3.55
NECTIN3-201ENST00000319792 GIMAP6Q6P9H5 292 aa37.22■■■■□ 3.55
NECTIN3-201ENST00000319792 SLF2Q8IX21 1173 aa37.22■■■■□ 3.55
NECTIN3-201ENST00000319792 CERS3Q8IU89 383 aa37.21■■■■□ 3.55
NECTIN3-201ENST00000319792 GAKO14976 1311 aa37.21■■■■□ 3.55
NECTIN3-201ENST00000319792 HAND2P61296 217 aa37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 COL9A3Q14050 684 aaPredicted RBP37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 CRNKL1Q9BZJ0 848 aaKnown RBP37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 LAMB1P07942 1786 aa37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 AK2P54819 239 aa37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 KLHL34Q8N239 644 aa37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 FBXW7Q969H0 707 aa37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 NBPF3Q9H094 633 aa37.2■■■■□ 3.55
NECTIN3-201ENST00000319792 SDR42E1Q8WUS8 393 aa37.19■■■■□ 3.54
NECTIN3-201ENST00000319792 GPR75-ASB3A0A0A6YYF3 556 aa37.18■■■■□ 3.54
NECTIN3-201ENST00000319792 BAG3O95817 575 aa37.18■■■■□ 3.54
NECTIN3-201ENST00000319792 TDO2P48775 406 aa37.18■■■■□ 3.54
NECTIN3-201ENST00000319792 DACT2Q5SW24 774 aa37.18■■■■□ 3.54
NECTIN3-201ENST00000319792 COL4A5P29400 1685 aa37.17■■■■□ 3.54
NECTIN3-201ENST00000319792 NOL10Q9BSC4 688 aaKnown RBP37.17■■■■□ 3.54
NECTIN3-201ENST00000319792 KCNQ5Q9NR82 932 aa37.17■■■■□ 3.54
NECTIN3-201ENST00000319792 USP17L3A6NCW0 530 aa37.16■■■■□ 3.54
NECTIN3-201ENST00000319792 USP17L4A6NCW7 530 aa37.16■■■■□ 3.54
NECTIN3-201ENST00000319792 USP17L1Q7RTZ2 530 aa37.16■■■■□ 3.54
NECTIN3-201ENST00000319792 TMX3Q96JJ7 454 aa37.16■■■■□ 3.54
NECTIN3-201ENST00000319792 FOCADQ5VW36 1801 aa37.16■■■■□ 3.54
NECTIN3-201ENST00000319792 ATP8A2Q9NTI2 1148 aa37.15■■■■□ 3.54
NECTIN3-201ENST00000319792 NAV1Q8NEY1 1877 aa37.15■■■■□ 3.54
NECTIN3-201ENST00000319792 DHX32Q7L7V1 743 aaKnown RBP37.15■■■■□ 3.54
NECTIN3-201ENST00000319792 TBC1D10CQ8IV04 446 aa37.15■■■■□ 3.54
NECTIN3-201ENST00000319792 ZNF277Q9NRM2 450 aaPredicted RBP37.15■■■■□ 3.54
NECTIN3-201ENST00000319792 YDJCA8MPS7 323 aa37.14■■■■□ 3.54
NECTIN3-201ENST00000319792 MXD3Q9BW11 206 aa37.14■■■■□ 3.54
NECTIN3-201ENST00000319792 LIMCH1Q9UPQ0 1083 aa37.14■■■■□ 3.54
NECTIN3-201ENST00000319792 EXOSC10Q01780 885 aaKnown RBP37.13■■■■□ 3.53
NECTIN3-201ENST00000319792 ANKRD1Q15327 319 aa37.13■■■■□ 3.53
NECTIN3-201ENST00000319792 LARGE2Q8N3Y3 721 aa37.13■■■■□ 3.53
NECTIN3-201ENST00000319792 ANAPC4Q9UJX5 808 aa37.13■■■■□ 3.53
NECTIN3-201ENST00000319792 TTF2Q9UNY4 1162 aaKnown RBP37.13■■■■□ 3.53
NECTIN3-201ENST00000319792 BTDP43251 543 aa37.12■■■■□ 3.53
NECTIN3-201ENST00000319792 NLGN2Q8NFZ4 835 aa37.12■■■■□ 3.53
NECTIN3-201ENST00000319792 DCP1AQ9NPI6 582 aaPredicted RBP37.12■■■■□ 3.53
NECTIN3-201ENST00000319792 ADAMTSL1Q8N6G6 1762 aa37.12■■■■□ 3.53
NECTIN3-201ENST00000319792 PLCG2P16885 1265 aa37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 CUL4AQ13619 759 aa37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 MB21D2Q8IYB1 491 aaPredicted RBP37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 NCOA7Q8NI08 942 aa37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 SH3RF3Q8TEJ3 882 aaPredicted RBP37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 TAOK3Q9H2K8 898 aa37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 DAGLAQ9Y4D2 1042 aa37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 DDX60LQ5H9U9 1706 aaKnown RBP37.11■■■■□ 3.53
NECTIN3-201ENST00000319792 IARSP41252 1262 aaKnown RBP37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 MRIQ9BWK5 157 aa37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 BCS1LQ9Y276 419 aa37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 TOB2Q14106 344 aaPredicted RBP37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 HHIPL2Q6UWX4 724 aa37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 NOL8Q76FK4 1167 aaKnown RBP37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 SPRYD3Q8NCJ5 442 aa37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 WDR19Q8NEZ3 1342 aa37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 TCEANC2Q96MN5 208 aa37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 LTBP3Q9NS15 1303 aa37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 MKRN1Q9UHC7 482 aaKnown RBP37.1■■■■□ 3.53
NECTIN3-201ENST00000319792 PPARAQ07869 468 aa37.09■■■■□ 3.53
NECTIN3-201ENST00000319792 ECM29Q5VYK3 1845 aa37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 NFKBIEO00221 500 aa37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 HSP90AA1P07900 732 aaKnown RBP37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 AKNAD1Q5T1N1 836 aa37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 FBXL16Q8N461 479 aa37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 STAG1Q8WVM7 1258 aa37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 ZSCAN31Q96LW9 406 aaPredicted RBP37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 AGXT2Q9BYV1 514 aa37.08■■■■□ 3.53
NECTIN3-201ENST00000319792 DDIT3P35638 169 aa37.07■■■■□ 3.53
NECTIN3-201ENST00000319792 RHBDL3P58872 404 aa37.07■■■■□ 3.53
NECTIN3-201ENST00000319792 HDLBPQ00341 1268 aaKnown RBP37.07■■■■□ 3.53
NECTIN3-201ENST00000319792 SBK1Q52WX2 424 aa37.07■■■■□ 3.53
NECTIN3-201ENST00000319792 RALYLQ86SE5 291 aaKnown RBP37.07■■■■□ 3.53
NECTIN3-201ENST00000319792 SLKQ9H2G2 1235 aaPredicted RBP37.07■■■■□ 3.53
NECTIN3-201ENST00000319792 F8W031 263 aaPredicted RBP37.06■■■■□ 3.52
NECTIN3-201ENST00000319792 CTDSPL2Q05D32 466 aa37.06■■■■□ 3.52
NECTIN3-201ENST00000319792 TRDNQ13061 729 aa37.06■■■■□ 3.52
NECTIN3-201ENST00000319792 CTR9Q6PD62 1173 aa37.06■■■■□ 3.52
NECTIN3-201ENST00000319792 ARPP21Q9UBL0 812 aaPredicted RBP37.06■■■■□ 3.52
NECTIN3-201ENST00000319792 Q6ZUG5 572 aa37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 TEKT1Q969V4 418 aa37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 SH2B1Q9NRF2 756 aaPredicted RBP37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 NEDD4P46934 1319 aa37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 MCM5P33992 734 aa37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 NIM1KQ8IY84 436 aa37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 INTS4Q96HW7 963 aaKnown RBP37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 RNF41Q9H4P4 317 aaPredicted RBP37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 CNNM2Q9H8M5 875 aa37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 ZNRF3Q9ULT6 936 aa37.05■■■■□ 3.52
NECTIN3-201ENST00000319792 MYO3BQ8WXR4 1341 aa37.04■■■■□ 3.52
NECTIN3-201ENST00000319792 USP5P45974 858 aa37.04■■■■□ 3.52
NECTIN3-201ENST00000319792 TACC3Q9Y6A5 838 aa37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms