RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 CHRNDQ07001 517 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 ANKRD2Q9GZV1 360 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 PGAP2Q9UHJ9 254 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 GUCY2CP25092 1073 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 RPS12P25398 132 aaKnown RBP11.68□□□□□ -0.54
KARS-202ENST00000319410 CALRP27797 417 aaKnown RBP11.68□□□□□ -0.54
KARS-202ENST00000319410 ANAPC15P60006 121 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 KIF4BQ2VIQ3 1234 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 RSBN1LQ6PCB5 846 aaPredicted RBP11.68□□□□□ -0.54
KARS-202ENST00000319410 RNF217Q8TC41 542 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 ZNF804BA4D1E1 1349 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 TRPM7Q96QT4 1865 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 MED23Q9ULK4 1368 aa11.68□□□□□ -0.54
KARS-202ENST00000319410 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 RFX5P48382 616 aaPredicted RBP11.67□□□□□ -0.54
KARS-202ENST00000319410 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 ZC3H15Q8WU90 426 aaKnown RBP11.67□□□□□ -0.54
KARS-202ENST00000319410 RASSF4Q9H2L5 321 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 WDR33Q9C0J8 1336 aaKnown RBP11.67□□□□□ -0.54
KARS-202ENST00000319410 POLR2AP24928 1970 aaKnown RBP11.67□□□□□ -0.54
KARS-202ENST00000319410 FOXN1O15353 648 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 U2AF2P26368 475 aaKnown RBP eCLIP11.67□□□□□ -0.54
KARS-202ENST00000319410 ATP8B2P98198 1209 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 GBP4Q96PP9 640 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 GGA3Q9NZ52 723 aa11.67□□□□□ -0.54
KARS-202ENST00000319410 CIAO1O76071 339 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 KCNA4P22459 653 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 C20orf194Q5TEA3 1177 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 SKAP1Q86WV1 359 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 CAPNS2Q96L46 248 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 COPRSQ9NQ92 184 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 LEMD3Q9Y2U8 911 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 RAD50Q92878 1312 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 AOC2O75106 756 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 LDHAL6AQ6ZMR3 332 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 RPAP2Q8IXW5 612 aaPredicted RBP11.66□□□□□ -0.54
KARS-202ENST00000319410 ANKRD7Q92527 254 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 GMLQ99445 158 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
KARS-202ENST00000319410 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
KARS-202ENST00000319410 POLA2Q14181 598 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 DACT2Q5SW24 774 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 SAPCD2Q86UD0 394 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 DCPSQ96C86 337 aaKnown RBP11.65□□□□□ -0.54
KARS-202ENST00000319410 JAG2Q9Y219 1238 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 RIPOR2Q9Y4F9 1068 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 PSME4Q14997 1843 aa11.65□□□□□ -0.54
KARS-202ENST00000319410 GOLGA6L6A8MZA4 724 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 TDO2P48775 406 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 SCARF1Q14162 830 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 ZKSCAN8Q15776 578 aaPredicted RBP11.65□□□□□ -0.55
KARS-202ENST00000319410 ANGEL2Q5VTE6 544 aaKnown RBP11.65□□□□□ -0.55
KARS-202ENST00000319410 AGBL3Q8NEM8 1001 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 SSH3Q8TE77 659 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.55
KARS-202ENST00000319410 COA1Q9GZY4 146 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.55
KARS-202ENST00000319410 EYA2O00167 538 aa11.64□□□□□ -0.55
KARS-202ENST00000319410 ZNF280AP59817 542 aaPredicted RBP11.64□□□□□ -0.55
KARS-202ENST00000319410 GTF2IP78347 998 aa11.64□□□□□ -0.55
KARS-202ENST00000319410 C15orf52Q6ZUT6 534 aaKnown RBP11.64□□□□□ -0.55
KARS-202ENST00000319410 MED4Q9NPJ6 270 aa11.64□□□□□ -0.55
KARS-202ENST00000319410 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
KARS-202ENST00000319410 CAPN15O75808 1086 aa11.64□□□□□ -0.55
KARS-202ENST00000319410 TTLL5Q6EMB2 1281 aa11.64□□□□□ -0.55
KARS-202ENST00000319410 KIAA0825Q8IV33 1275 aa11.64□□□□□ -0.55
KARS-202ENST00000319410 ZNF646O15015 1829 aaPredicted RBP11.63□□□□□ -0.55
KARS-202ENST00000319410 A0A1B0GUL6 1792 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 PRAMEF18Q5VWM3 479 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 CEP85Q6P2H3 762 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 OTUD6BQ8N6M0 293 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 CD209Q9NNX6 404 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
KARS-202ENST00000319410 SASH1O94885 1247 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 IL15P40933 162 aaPredicted RBP11.62□□□□□ -0.55
KARS-202ENST00000319410 STRIP1Q5VSL9 837 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 AIDAQ96BJ3 306 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 PRDM16Q9HAZ2 1276 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 IRS2Q9Y4H2 1338 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 MAFGO15525 162 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 HMMRO75330 724 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 HUNKP57058 714 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 ZIC5Q96T25 663 aa11.62□□□□□ -0.55
KARS-202ENST00000319410 DIAPH3Q9NSV4 1193 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms