RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 PSME4Q14997 1843 aa32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 PPP4CP60510 307 aa32.77■■■□□ 2.84
CTDNEP1-201ENST00000318988 RNF20Q5VTR2 975 aa32.77■■■□□ 2.84
CTDNEP1-201ENST00000318988 SERPINA10Q9UK55 444 aa32.77■■■□□ 2.84
CTDNEP1-201ENST00000318988 GJA3Q9Y6H8 435 aa32.77■■■□□ 2.84
CTDNEP1-201ENST00000318988 SRCAPQ6ZRS2 3230 aa32.77■■■□□ 2.84
CTDNEP1-201ENST00000318988 RPS12P25398 132 aaKnown RBP32.77■■■□□ 2.84
CTDNEP1-201ENST00000318988 GMLQ99445 158 aa32.77■■■□□ 2.84
CTDNEP1-201ENST00000318988 RPAP1Q9BWH6 1393 aaPredicted RBP32.76■■■□□ 2.84
CTDNEP1-201ENST00000318988 DDRGK1Q96HY6 314 aa32.76■■■□□ 2.83
CTDNEP1-201ENST00000318988 MYH2Q9UKX2 1941 aa32.75■■■□□ 2.83
CTDNEP1-201ENST00000318988 USP17L8P0C7I0 530 aa32.75■■■□□ 2.83
CTDNEP1-201ENST00000318988 HSPA4P34932 840 aa32.75■■■□□ 2.83
CTDNEP1-201ENST00000318988 C9orf131Q5VYM1 1079 aa32.75■■■□□ 2.83
CTDNEP1-201ENST00000318988 ZDHHC15Q96MV8 337 aa32.74■■■□□ 2.83
CTDNEP1-201ENST00000318988 ZNF646O15015 1829 aaPredicted RBP32.74■■■□□ 2.83
CTDNEP1-201ENST00000318988 PRKAB2O43741 272 aa32.73■■■□□ 2.83
CTDNEP1-201ENST00000318988 ZKSCAN1P17029 563 aaPredicted RBP32.73■■■□□ 2.83
CTDNEP1-201ENST00000318988 USP5P45974 858 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 TDO2P48775 406 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 MMP14P50281 582 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 NECTIN1Q15223 517 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 SH3RF3Q8TEJ3 882 aaPredicted RBP32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 NAPBQ9H115 298 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 ZNF541Q9H0D2 1346 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 GSG1L2A8MUP6 293 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 FGAP02671 866 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 CREB3L3Q68CJ9 461 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 IFNL3Q8IZI9 196 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 SDR42E1Q8WUS8 393 aa32.72■■■□□ 2.83
CTDNEP1-201ENST00000318988 ALX1Q15699 326 aa32.71■■■□□ 2.83
CTDNEP1-201ENST00000318988 CFAP100Q494V2 611 aa32.71■■■□□ 2.83
CTDNEP1-201ENST00000318988 TEX11Q8IYF3 940 aa32.71■■■□□ 2.83
CTDNEP1-201ENST00000318988 ATP8A2Q9NTI2 1148 aa32.71■■■□□ 2.83
CTDNEP1-201ENST00000318988 FOXP2O15409 715 aa32.7■■■□□ 2.83
CTDNEP1-201ENST00000318988 ANAPC15P60006 121 aa32.7■■■□□ 2.83
CTDNEP1-201ENST00000318988 IMMTQ16891 758 aaKnown RBP32.7■■■□□ 2.83
CTDNEP1-201ENST00000318988 RBM19Q9Y4C8 960 aaKnown RBP32.7■■■□□ 2.83
CTDNEP1-201ENST00000318988 DICER1Q9UPY3 1922 aaKnown RBP32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 DCAF8L1A6NGE4 600 aa32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 SLC27A2O14975 620 aa32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 SBF1O95248 1867 aa32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 GMPSP49915 693 aaPredicted RBP32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 GIMAP6Q6P9H5 292 aa32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 GPC2Q8N158 579 aa32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 DPF2Q92785 391 aa32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 USP40Q9NVE5 1235 aa32.69■■■□□ 2.82
CTDNEP1-201ENST00000318988 DLGAP5Q15398 846 aa32.68■■■□□ 2.82
CTDNEP1-201ENST00000318988 APOBEC3HQ6NTF7 200 aaKnown RBP32.68■■■□□ 2.82
CTDNEP1-201ENST00000318988 ZMYM6O95789 1325 aa32.68■■■□□ 2.82
CTDNEP1-201ENST00000318988 ZNF213O14771 459 aa32.67■■■□□ 2.82
CTDNEP1-201ENST00000318988 RHBDL3P58872 404 aa32.67■■■□□ 2.82
CTDNEP1-201ENST00000318988 TGFBRAP1Q8WUH2 860 aa32.67■■■□□ 2.82
CTDNEP1-201ENST00000318988 EPB41L4AQ9HCS5 686 aaPredicted RBP32.67■■■□□ 2.82
CTDNEP1-201ENST00000318988 PALD1Q9ULE6 856 aa32.67■■■□□ 2.82
CTDNEP1-201ENST00000318988 CDC42EP5Q6NZY7 148 aa32.65■■■□□ 2.82
CTDNEP1-201ENST00000318988 SNX14Q9Y5W7 946 aa32.65■■■□□ 2.82
CTDNEP1-201ENST00000318988 AMOTL1Q8IY63 956 aa32.64■■■□□ 2.82
CTDNEP1-201ENST00000318988 KCNB2Q92953 911 aa32.64■■■□□ 2.82
CTDNEP1-201ENST00000318988 DCP1AQ9NPI6 582 aaPredicted RBP32.64■■■□□ 2.82
CTDNEP1-201ENST00000318988 CNOT7Q9UIV1 285 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-201ENST00000318988 CYP21A2P08686 494 aa32.63■■■□□ 2.81
CTDNEP1-201ENST00000318988 KRT32Q14532 448 aa32.63■■■□□ 2.81
CTDNEP1-201ENST00000318988 DPY19L2Q6NUT2 758 aa32.63■■■□□ 2.81
CTDNEP1-201ENST00000318988 MICALL2Q8IY33 904 aa32.63■■■□□ 2.81
CTDNEP1-201ENST00000318988 SPDYE2BA6NHP3 402 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 H7C1D1 291 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 SPDYE6P0CI01 402 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 ZNF280AP59817 542 aaPredicted RBP32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 RASEFQ8IZ41 740 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 MTMR14Q8NCE2 650 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 MYOZ2Q9NPC6 264 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 TMOD2Q9NZR1 351 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 PCDHAC2Q9Y5I4 1007 aa32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 ZC3H4Q9UPT8 1303 aaKnown RBP32.62■■■□□ 2.81
CTDNEP1-201ENST00000318988 HAND2P61296 217 aa32.61■■■□□ 2.81
CTDNEP1-201ENST00000318988 MAPKAPK5Q8IW41 473 aa32.61■■■□□ 2.81
CTDNEP1-201ENST00000318988 MCM9Q9NXL9 1143 aa32.61■■■□□ 2.81
CTDNEP1-201ENST00000318988 MYO1BO43795 1136 aa32.61■■■□□ 2.81
CTDNEP1-201ENST00000318988 ANP32AP39687 249 aaKnown RBP32.61■■■□□ 2.81
CTDNEP1-201ENST00000318988 PRMT6Q96LA8 375 aaPredicted RBP32.61■■■□□ 2.81
CTDNEP1-201ENST00000318988 ARPP21Q9UBL0 812 aaPredicted RBP32.61■■■□□ 2.81
CTDNEP1-201ENST00000318988 TIAM2Q8IVF5 1701 aa32.6■■■□□ 2.81
CTDNEP1-201ENST00000318988 MINDY4BA8MYZ0 360 aa32.6■■■□□ 2.81
CTDNEP1-201ENST00000318988 TSGA10IPQ3SY00 556 aa32.6■■■□□ 2.81
CTDNEP1-201ENST00000318988 TDRD3Q9H7E2 651 aaKnown RBP32.6■■■□□ 2.81
CTDNEP1-201ENST00000318988 PSMA5P28066 241 aa32.59■■■□□ 2.81
CTDNEP1-201ENST00000318988 PICALMQ13492 652 aa32.59■■■□□ 2.81
CTDNEP1-201ENST00000318988 RABEP1Q15276 862 aa32.59■■■□□ 2.81
CTDNEP1-201ENST00000318988 KIF2CQ99661 725 aa32.59■■■□□ 2.81
CTDNEP1-201ENST00000318988 ADAMTSL1Q8N6G6 1762 aa32.59■■■□□ 2.81
CTDNEP1-201ENST00000318988 FLT1P17948 1338 aa32.58■■■□□ 2.81
CTDNEP1-201ENST00000318988 USP17L12C9JPN9 530 aa32.58■■■□□ 2.81
CTDNEP1-201ENST00000318988 USP17L21D6R901 530 aa32.58■■■□□ 2.81
CTDNEP1-201ENST00000318988 DDNO94850 711 aaPredicted RBP32.58■■■□□ 2.81
CTDNEP1-201ENST00000318988 POLR3DP05423 398 aaPredicted RBP32.57■■■□□ 2.8
CTDNEP1-201ENST00000318988 LMOD1P29536 600 aaPredicted RBP32.57■■■□□ 2.8
CTDNEP1-201ENST00000318988 RBM26Q5T8P6 1007 aaKnown RBP32.57■■■□□ 2.8
CTDNEP1-201ENST00000318988 CTR9Q6PD62 1173 aa32.57■■■□□ 2.8
CTDNEP1-201ENST00000318988 IL17RAQ96F46 866 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms