RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 ZSWIM4Q9H7M6 989 aa18.53■□□□□ 0.56
CRAT-201ENST00000318080 RSPH14Q9UHP6 348 aa18.53■□□□□ 0.56
CRAT-201ENST00000318080 AFF2P51816 1311 aa18.52■□□□□ 0.56
CRAT-201ENST00000318080 C5P01031 1676 aa18.52■□□□□ 0.56
CRAT-201ENST00000318080 FOXP2O15409 715 aa18.52■□□□□ 0.56
CRAT-201ENST00000318080 ZRANB2O95218 330 aaKnown RBP eCLIP18.52■□□□□ 0.56
CRAT-201ENST00000318080 MARCKSP29966 332 aaPredicted RBP18.52■□□□□ 0.56
CRAT-201ENST00000318080 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
CRAT-201ENST00000318080 DPF2Q92785 391 aa18.52■□□□□ 0.56
CRAT-201ENST00000318080 GSDMDP57764 484 aa18.52■□□□□ 0.55
CRAT-201ENST00000318080 FOXO4P98177 505 aa18.52■□□□□ 0.55
CRAT-201ENST00000318080 NKX2-3Q8TAU0 364 aa18.52■□□□□ 0.55
CRAT-201ENST00000318080 ZNF274Q96GC6 653 aaPredicted RBP18.52■□□□□ 0.55
CRAT-201ENST00000318080 HSD3B7Q9H2F3 369 aa18.52■□□□□ 0.55
CRAT-201ENST00000318080 HELLSQ9NRZ9 838 aa18.52■□□□□ 0.55
CRAT-201ENST00000318080 ZNF202O95125 648 aa18.51■□□□□ 0.55
CRAT-201ENST00000318080 SFPQP23246 707 aaKnown RBP eCLIP18.51■□□□□ 0.55
CRAT-201ENST00000318080 TTC5Q8N0Z6 440 aa18.51■□□□□ 0.55
CRAT-201ENST00000318080 MNS1Q8NEH6 495 aa18.51■□□□□ 0.55
CRAT-201ENST00000318080 AIFM3Q96NN9 605 aa18.51■□□□□ 0.55
CRAT-201ENST00000318080 DENND2AQ9ULE3 1009 aa18.51■□□□□ 0.55
CRAT-201ENST00000318080 WDHD1O75717 1129 aaPredicted RBP18.51■□□□□ 0.55
CRAT-201ENST00000318080 PUS3Q9BZE2 481 aaKnown RBP18.51■□□□□ 0.55
CRAT-201ENST00000318080 MROH7-TTC4A0A0A0MT08 1334 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 MYH15Q9Y2K3 1946 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 ANKRD65E5RJM6 399 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 SPTLC2O15270 562 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 SLC3A2P08195 630 aaKnown RBP18.5■□□□□ 0.55
CRAT-201ENST00000318080 CCDC191Q8NCU4 936 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 KCND1Q9NSA2 647 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 HPS5Q9UPZ3 1129 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 NWD2Q9ULI1 1742 aa18.5■□□□□ 0.55
CRAT-201ENST00000318080 TNNT3P45378 269 aaPredicted RBP18.5■□□□□ 0.55
CRAT-201ENST00000318080 RFX7Q2KHR2 1363 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 A0A1W2PQ27 194 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 A0A1W2PQ64 194 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 A0A1W2PQD8 194 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
CRAT-201ENST00000318080 VPS72Q15906 364 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 TEX35Q5T0J7 233 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
CRAT-201ENST00000318080 ATL3Q6DD88 541 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
CRAT-201ENST00000318080 TMOD3Q9NYL9 352 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 WNK3Q9BYP7 1800 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 RNF113AO15541 343 aaKnown RBP18.49■□□□□ 0.55
CRAT-201ENST00000318080 TBC1D8O95759 1140 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 IFIT1P09914 478 aaKnown RBP18.49■□□□□ 0.55
CRAT-201ENST00000318080 PFKFB1P16118 471 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 EVCP57679 992 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 ZRSR1Q15695 479 aaKnown RBP18.49■□□□□ 0.55
CRAT-201ENST00000318080 MYSM1Q5VVJ2 828 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 PTF1AQ7RTS3 328 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 IMPACTQ9P2X3 320 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 TNS2Q63HR2 1409 aa18.49■□□□□ 0.55
CRAT-201ENST00000318080 KLF18A0A0U1RQI7 1052 aa18.48■□□□□ 0.55
CRAT-201ENST00000318080 FBXO18Q8NFZ0 1043 aa18.48■□□□□ 0.55
CRAT-201ENST00000318080 SNRPA1P09661 255 aaKnown RBP18.48■□□□□ 0.55
CRAT-201ENST00000318080 FANCCQ00597 558 aa18.48■□□□□ 0.55
CRAT-201ENST00000318080 KCNQ2O43526 872 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 LMAN1P49257 510 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 NLRP12P59046 1061 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 TRIM65Q6PJ69 517 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 TTLL7Q6ZT98 887 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 A0A1B0GUL7 405 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 GOLGA8BA8MQT2 603 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 RXRAP19793 462 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 ZSCAN26Q16670 478 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
CRAT-201ENST00000318080 TMEM232C9JQI7 657 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 PRC1O43663 620 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 ANTXR2P58335 489 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 ETF1P62495 437 aaKnown RBP18.47■□□□□ 0.55
CRAT-201ENST00000318080 SMC1AQ14683 1233 aaKnown RBP18.47■□□□□ 0.55
CRAT-201ENST00000318080 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
CRAT-201ENST00000318080 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
CRAT-201ENST00000318080 TADA3O75528 432 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 ADORA1P30542 326 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 FOXR1Q6PIV2 292 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 CCDC150Q8NCX0 1101 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
CRAT-201ENST00000318080 WDR24Q96S15 920 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 POLR3EQ9NVU0 708 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 NBPF26B4DH59 902 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 FGAP02671 866 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 SCARF1Q14162 830 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 WASHC4Q2M389 1173 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 NBPF14Q5TI25 921 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 NBPF10Q6P3W6 841 aaKnown RBP18.46■□□□□ 0.55
CRAT-201ENST00000318080 BARGINQ6ZT62 677 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 NBPF15Q8N660 670 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 KCNG4Q8TDN1 519 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 ATG3Q9NT62 314 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 GLI3P10071 1580 aa18.46■□□□□ 0.55
CRAT-201ENST00000318080 UBE2Q2LH0YL09 131 aa18.45■□□□□ 0.54
CRAT-201ENST00000318080 H3BQF6 201 aa18.45■□□□□ 0.54
CRAT-201ENST00000318080 PNOCQ13519 176 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms