RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SMARCA5O60264 1052 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ATP5HO75947 161 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 SATB1Q01826 763 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TTF1Q15361 905 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 GLE1Q53GS7 698 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 GIMAP6Q6P9H5 292 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TTC5Q8N0Z6 440 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CNNM3Q8NE01 707 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 Q9H521 79 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 LMNAP02545 664 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 SYKP43405 635 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TMED1Q13445 227 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TUBB6Q9BUF5 446 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 TARSL2A2RTX5 802 aaKnown RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 AKR1B15C9JRZ8 316 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 NBPF14Q5TI25 921 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 PHLDB3Q6NSJ2 640 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC84Q86UT8 332 aaPredicted RBP5.08□□□□□ -1.6
CNOT1-201ENST00000317147 AFAP1Q8N556 730 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC26Q8TAB7 109 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 PLA2R1Q13018 1463 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 LAMA3Q16787 3333 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 ARHGEF40Q8TER5 1519 aa5.08□□□□□ -1.6
CNOT1-201ENST00000317147 CD2BP2O95400 341 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 MYL1P05976 194 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 PDE1AP54750 535 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 WWC2Q6AWC2 1192 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 BICDL1Q6ZP65 573 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 SMC1BQ8NDV3 1235 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 TRIM58Q8NG06 486 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 ZC3H15Q8WU90 426 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 MIS12Q9H081 205 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 CNNM2Q9H8M5 875 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 GNL3LQ9NVN8 582 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 EID1Q9Y6B2 187 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 PTCH1Q13635 1447 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 A0A087WZG4 1122 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 CPLX4Q7Z7G2 160 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 RETREG2Q8NC44 543 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 PPP1R12CQ9BZL4 782 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 OSBPL3Q9H4L5 887 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 TFIP11Q9UBB9 837 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 CEP57Q86XR8 500 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 FBXO18Q8NFZ0 1043 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 BSDC1Q9NW68 430 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 MYO1CO00159 1063 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 MARCH6O60337 910 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 U2AF2P26368 475 aaKnown RBP eCLIP5.07□□□□□ -1.63e-7■■□□□ 12.4
CNOT1-201ENST00000317147 SMC6Q96SB8 1091 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 JADE2Q9NQC1 790 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 FAM114A2Q9NRY5 505 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 CD109Q6YHK3 1445 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 DOCK8Q8NF50 2099 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 MAP4K4O95819 1239 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 ATP2B1P20020 1258 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 CKAP2LQ8IYA6 745 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 A0A0C4DFX4 3053 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 TRIM21P19474 475 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 PTGS1P23219 599 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 EIF3BP55884 814 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 ELF2Q15723 593 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 USP37Q86T82 979 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 LRRC8AQ8IWT6 810 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 MPHOSPH6Q99547 160 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 TRMT1Q9NXH9 659 aaKnown RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 DENND4BO75064 1496 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 ATP10BO94823 1461 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 HIP1RO75146 1068 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 NMIQ13287 307 aaPredicted RBP5.07□□□□□ -1.6
CNOT1-201ENST00000317147 STMN2Q93045 179 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 HAUS4Q9H6D7 363 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 TTC21AQ8NDW8 1320 aa5.07□□□□□ -1.6
CNOT1-201ENST00000317147 PSMA7O14818 248 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 SDSP20132 328 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 GTF3C1Q12789 2109 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 STXBP4Q6ZWJ1 553 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 SYCE1Q8N0S2 351 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 UNC13CQ8NB66 2214 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 WHAMMQ8TF30 809 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 FBXO41Q8TF61 875 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 ZMAT2Q96NC0 199 aaKnown RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 RAI14Q9P0K7 980 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 DAAM1Q9Y4D1 1078 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 LRRD1A4D1F6 860 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 TRPC3Q13507 836 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 RILPL1Q5EBL4 403 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 WDR78Q5VTH9 848 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 HNRNPLLQ8WVV9 542 aaKnown RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 STRN4Q9NRL3 753 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 HOMER3Q9NSC5 361 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 ABCA1O95477 2261 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 FOXP2O15409 715 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 GCKP35557 465 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CRYMQ14894 314 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 CCDC6Q16204 474 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 NBPF6Q5VWK0 638 aa5.06□□□□□ -1.6
CNOT1-201ENST00000317147 NBPF5PQ86XG9 351 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 C16orf71Q8IYS4 520 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-201ENST00000317147 PIP4K2CQ8TBX8 421 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms