RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 SLC20A2Q08357 652 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 GPR161Q8N6U8 529 aaKnown RBP18.76■□□□□ 0.59
CACFD1-202ENST00000316948 H7C1W4 665 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
CACFD1-202ENST00000316948 ZSCAN26Q16670 478 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 TOGARAM2Q6ZUX3 1019 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 BRAPQ7Z569 592 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 CCDC191Q8NCU4 936 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 BAG1Q99933 345 aaPredicted RBP18.76■□□□□ 0.59
CACFD1-202ENST00000316948 PUS3Q9BZE2 481 aaKnown RBP18.76■□□□□ 0.59
CACFD1-202ENST00000316948 UBXN6Q9BZV1 441 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 A0A1B0GUL7 405 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 RNF113AO15541 343 aaKnown RBP18.76■□□□□ 0.59
CACFD1-202ENST00000316948 ARHGAP6O43182 974 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 ATP8B1O43520 1251 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 ADKP55263 362 aaKnown RBP18.76■□□□□ 0.59
CACFD1-202ENST00000316948 KARSQ15046 597 aaKnown RBP18.76■□□□□ 0.59
CACFD1-202ENST00000316948 DESI2Q9BSY9 194 aa18.76■□□□□ 0.59
CACFD1-202ENST00000316948 LMAN1P49257 510 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 MAP3K9P80192 1104 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 AIFM3Q96NN9 605 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 ZBTB3Q9H5J0 574 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 KIF23Q02241 960 aaPredicted RBP18.75■□□□□ 0.59
CACFD1-202ENST00000316948 HSP90AB3PQ58FF7 597 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
CACFD1-202ENST00000316948 TMEM139Q8IV31 216 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 CHMP4CQ96CF2 233 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 CLIC6Q96NY7 704 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 TSPYL1Q9H0U9 437 aa18.75■□□□□ 0.59
CACFD1-202ENST00000316948 PRC1O43663 620 aa18.74■□□□□ 0.59
CACFD1-202ENST00000316948 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
CACFD1-202ENST00000316948 DHX58Q96C10 678 aa18.74■□□□□ 0.59
CACFD1-202ENST00000316948 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
CACFD1-202ENST00000316948 CWC25Q9NXE8 425 aaPredicted RBP18.74■□□□□ 0.59
CACFD1-202ENST00000316948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
CACFD1-202ENST00000316948 MRFAP1Q9Y605 127 aa18.74■□□□□ 0.59
CACFD1-202ENST00000316948 DHX16O60231 1041 aaKnown RBP18.74■□□□□ 0.59
CACFD1-202ENST00000316948 FUT8Q9BYC5 575 aa18.74■□□□□ 0.59
CACFD1-202ENST00000316948 TUBE1Q9UJT0 475 aa18.74■□□□□ 0.59
CACFD1-202ENST00000316948 EYA2O00167 538 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 A1BGP04217 495 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 SLC39A14Q15043 492 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 SHC4Q6S5L8 630 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 C10orf67Q8IYJ2 551 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 IPO4Q8TEX9 1081 aaKnown RBP18.73■□□□□ 0.59
CACFD1-202ENST00000316948 LCMT1Q9UIC8 334 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 HPS5Q9UPZ3 1129 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 TRIM66O15016 1216 aa18.73■□□□□ 0.59
CACFD1-202ENST00000316948 TNNT3P45378 269 aaPredicted RBP18.73■□□□□ 0.59
CACFD1-202ENST00000316948 IRX2Q9BZI1 471 aaPredicted RBP18.73■□□□□ 0.59
CACFD1-202ENST00000316948 PDE4BQ07343 736 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 WASHC4Q2M389 1173 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 MUM1L1Q5H9M0 696 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 FCHSD1Q86WN1 690 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 CCDC12Q8WUD4 166 aaPredicted RBP18.72■□□□□ 0.59
CACFD1-202ENST00000316948 ADAM21Q9UKJ8 722 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 H3BQF6 201 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 CDC27P30260 824 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 LONRF2Q1L5Z9 754 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 RSRC2Q7L4I2 434 aaKnown RBP18.72■□□□□ 0.59
CACFD1-202ENST00000316948 GOLGA1Q92805 767 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 AK7Q96M32 723 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
CACFD1-202ENST00000316948 C1orf167Q5SNV9 1468 aa18.72■□□□□ 0.59
CACFD1-202ENST00000316948 LONRF3Q496Y0 759 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 FOXP4Q8IVH2 680 aaPredicted RBP18.71■□□□□ 0.59
CACFD1-202ENST00000316948 GPR108Q9NPR9 543 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 PCDHA5Q9Y5H7 936 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 FOXN1O15353 648 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 FOXP2O15409 715 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 RXRAP19793 462 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 ADORA1P30542 326 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 MCM6Q14566 821 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 CNNM3Q8NE01 707 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 RABGGTAQ92696 567 aa18.71■□□□□ 0.59
CACFD1-202ENST00000316948 METTL16Q86W50 562 aaKnown RBP18.7■□□□□ 0.58
CACFD1-202ENST00000316948 PUF60Q9UHX1 559 aaKnown RBP18.7■□□□□ 0.58
CACFD1-202ENST00000316948 MTF1Q14872 753 aa18.7■□□□□ 0.58
CACFD1-202ENST00000316948 IMMTQ16891 758 aaKnown RBP18.7■□□□□ 0.58
CACFD1-202ENST00000316948 KIFC2Q96AC6 838 aa18.7■□□□□ 0.58
CACFD1-202ENST00000316948 RASSF4Q9H2L5 321 aa18.7■□□□□ 0.58
CACFD1-202ENST00000316948 LZTFL1Q9NQ48 299 aa18.7■□□□□ 0.58
CACFD1-202ENST00000316948 RSPH14Q9UHP6 348 aa18.7■□□□□ 0.58
CACFD1-202ENST00000316948 GOLGA6L9A6NEM1 432 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 FGAP02671 866 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 BMP6P22004 513 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 TXLNAP40222 546 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 RALYLQ86SE5 291 aaKnown RBP18.69■□□□□ 0.58
CACFD1-202ENST00000316948 VPS37DQ86XT2 251 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
CACFD1-202ENST00000316948 TC2NQ8N9U0 490 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 HPSEQ9Y251 543 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 MYO1CO00159 1063 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 SCARF1Q14162 830 aa18.69■□□□□ 0.58
CACFD1-202ENST00000316948 C19orf44Q9H6X5 657 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms