RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PLEKHM2Q8IWE5 1019 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 TSPYL1Q9H0U9 437 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 SPC25Q9HBM1 224 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 AK2P54819 239 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
RFFL-201ENST00000315249 CNPY2Q9Y2B0 182 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 EZRP15311 586 aaKnown RBP15.31■□□□□ 0.04
RFFL-201ENST00000315249 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 UBE2HP62256 183 aa15.31■□□□□ 0.04
RFFL-201ENST00000315249 MAP3K15Q6ZN16 1313 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 PNMA6EA0A0J9YXQ4 647 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 ERLIN1O75477 346 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 CCDC172P0C7W6 258 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
RFFL-201ENST00000315249 ZSCAN12O43309 604 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 CHMLP26374 656 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 DCAF15Q66K64 600 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
RFFL-201ENST00000315249 ZBTB1Q9Y2K1 713 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 VWA3AA6NCI4 1184 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 PSMA7O14818 248 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 MYCP01106 439 aaPredicted RBP15.3■□□□□ 0.04
RFFL-201ENST00000315249 CPA1P15085 419 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 MAGI2Q86UL8 1455 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 PTPRTO14522 1441 aa15.3■□□□□ 0.04
RFFL-201ENST00000315249 RFX1P22670 979 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 ARAP3Q8WWN8 1544 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 GIMAP6Q6P9H5 292 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 SORBS3O60504 671 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
RFFL-201ENST00000315249 RAD17O75943 681 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 WDR17Q8IZU2 1322 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 PER1O15534 1290 aaPredicted RBP15.29■□□□□ 0.04
RFFL-201ENST00000315249 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 ZNF165P49910 485 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 APBB1IPQ7Z5R6 666 aaPredicted RBP15.29■□□□□ 0.04
RFFL-201ENST00000315249 AZI2Q9H6S1 392 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 GJC1P36383 396 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 CCT6AP40227 531 aaKnown RBP15.29■□□□□ 0.04
RFFL-201ENST00000315249 TFAP4Q01664 338 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
RFFL-201ENST00000315249 INSRP06213 1382 aa15.29■□□□□ 0.04
RFFL-201ENST00000315249 ZBTB7AO95365 584 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 CHRNDQ07001 517 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 SLC5A4Q9NY91 659 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 MKRN3Q13064 507 aaKnown RBP15.28■□□□□ 0.04
RFFL-201ENST00000315249 SPTLC2O15270 562 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 ACTN2P35609 894 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
RFFL-201ENST00000315249 M0QZ92 97 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 TBC1D32Q96NH3 1257 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 MAGI3Q5TCQ9 1506 aa15.28■□□□□ 0.04
RFFL-201ENST00000315249 CEP135Q66GS9 1140 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 MYL10Q9BUA6 226 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 USP25Q9UHP3 1055 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 PABPN1LA6NDY0 278 aaKnown RBP15.27■□□□□ 0.04
RFFL-201ENST00000315249 URI1O94763 535 aaPredicted RBP15.27■□□□□ 0.04
RFFL-201ENST00000315249 PIK3AP1Q6ZUJ8 805 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 GREM2Q9H772 168 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 PTPN14Q15678 1187 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 IFT74Q96LB3 600 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 ALS2CR12Q96Q35 445 aa15.27■□□□□ 0.04
RFFL-201ENST00000315249 NCAPG2Q86XI2 1143 aa15.27■□□□□ 0.03
RFFL-201ENST00000315249 ZNF804BA4D1E1 1349 aa15.27■□□□□ 0.03
RFFL-201ENST00000315249 hCG_1642624A0A1W2PR95 340 aa15.27■□□□□ 0.03
RFFL-201ENST00000315249 ERFEQ4G0M1 354 aa15.27■□□□□ 0.03
RFFL-201ENST00000315249 DCAF17Q5H9S7 520 aaPredicted RBP15.27■□□□□ 0.03
RFFL-201ENST00000315249 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.03
RFFL-201ENST00000315249 SDR42E1Q8WUS8 393 aa15.27■□□□□ 0.03
RFFL-201ENST00000315249 TMEM110-MUSTN1A8MSY1 372 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 OTUD7AQ8TE49 926 aaPredicted RBP15.26■□□□□ 0.03
RFFL-201ENST00000315249 MRPS27Q92552 414 aaKnown RBP15.26■□□□□ 0.03
RFFL-201ENST00000315249 FNBP1Q96RU3 617 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 CERKLQ49MI3 558 aaPredicted RBP15.26■□□□□ 0.03
RFFL-201ENST00000315249 SRP68Q9UHB9 627 aaKnown RBP15.26■□□□□ 0.03
RFFL-201ENST00000315249 DYDC1Q8WWB3 177 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 ERCC6L2Q5T890 1561 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 AKR1B10O60218 316 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 KIF4AO95239 1232 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 TXKP42681 527 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 UBASH3AP57075 661 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 KBTBD3Q8NAB2 608 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 TMEM87BQ96K49 555 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 ANGEL1Q9UNK9 670 aaKnown RBP15.26■□□□□ 0.03
RFFL-201ENST00000315249 ERVK-7P63135 1459 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 SMTNP53814 917 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 BCCIPQ9P287 314 aaKnown RBP eCLIP15.26■□□□□ 0.03
RFFL-201ENST00000315249 FRMPD2Q68DX3 1309 aaPredicted RBP15.26■□□□□ 0.03
RFFL-201ENST00000315249 PTGS1P23219 599 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 CCDC102AQ96A19 550 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 CEP83Q9Y592 693 aa15.26■□□□□ 0.03
RFFL-201ENST00000315249 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms