RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CAGE1Q8TC20 777 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 CBX8Q9HC52 389 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 SRP68Q9UHB9 627 aaKnown RBP7.09□□□□□ -1.27
PRKDC-201ENST00000314191 CEMIPQ8WUJ3 1361 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 NCAPD2Q15021 1401 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 ZSCAN12O43309 604 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 NSUN7Q8NE18 718 aaKnown RBP7.09□□□□□ -1.27
PRKDC-201ENST00000314191 TRMT1LQ7Z2T5 733 aaKnown RBP7.09□□□□□ -1.27
PRKDC-201ENST00000314191 BTBD18B2RXH4 712 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 KCNQ2O43526 872 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 CYP19A1P11511 503 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-201ENST00000314191 TFAP4Q01664 338 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 LAMC1P11047 1609 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 PIK3AP1Q6ZUJ8 805 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 GPS2Q13227 327 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 KANK3Q6NY19 840 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 LCORLQ8N3X6 602 aa7.09□□□□□ -1.27
PRKDC-201ENST00000314191 SCARF1Q14162 830 aa7.09□□□□□ -1.28
PRKDC-201ENST00000314191 IFNKQ9P0W0 207 aa7.09□□□□□ -1.28
PRKDC-201ENST00000314191 KRT2P35908 639 aa7.09□□□□□ -1.28
PRKDC-201ENST00000314191 NAPAP54920 295 aa7.09□□□□□ -1.28
PRKDC-201ENST00000314191 NOM1Q5C9Z4 860 aaKnown RBP7.09□□□□□ -1.28
PRKDC-201ENST00000314191 VPS54Q9P1Q0 977 aa7.09□□□□□ -1.28
PRKDC-201ENST00000314191 FSD2A1L4K1 749 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 NEMFO60524 1076 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 HS1BP3Q53T59 392 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 MAP7D2Q96T17 732 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 GGA1Q9UJY5 639 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 PRKCSHP14314 528 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-201ENST00000314191 ARHGAP29Q52LW3 1261 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 RBM17Q96I25 401 aaKnown RBP7.08□□□□□ -1.28
PRKDC-201ENST00000314191 ADD2P35612 726 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 GNAQP50148 359 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 KRI1Q8N9T8 703 aaKnown RBP7.08□□□□□ -1.28
PRKDC-201ENST00000314191 KAZALD1Q96I82 304 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 DNAJC5Q9H3Z4 198 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 DEF6Q9H4E7 631 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 TAF6LQ9Y6J9 622 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 RTL9Q8NET4 1388 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 ZNF654Q8IZM8 581 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 CCDC12Q8WUD4 166 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-201ENST00000314191 GSDMDP57764 484 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 STAMQ92783 540 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 COL3A1P02461 1466 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-201ENST00000314191 VWA3AA6NCI4 1184 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 ERVV-1B6SEH8 477 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 HMGB2P26583 209 aaKnown RBP7.08□□□□□ -1.28
PRKDC-201ENST00000314191 CAMSAP1Q5T5Y3 1602 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 TTC14Q96N46 770 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 PARP3Q9Y6F1 533 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 BMP15O95972 392 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 MCAMP43121 646 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 TOB2Q14106 344 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-201ENST00000314191 PDCL2Q8N4E4 241 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 CCDC148Q8NFR7 591 aa7.08□□□□□ -1.28
PRKDC-201ENST00000314191 TMEM266Q2M3C6 531 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 RILPL1Q5EBL4 403 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 TNS3Q68CZ2 1445 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 TNKSO95271 1327 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 YEATS4O95619 227 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 MTERF4Q7Z6M4 381 aaKnown RBP7.07□□□□□ -1.28
PRKDC-201ENST00000314191 CDC42BPGQ6DT37 1551 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 MYL5Q02045 173 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 NR1I2O75469 434 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 STAT6P42226 847 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 CALML4Q96GE6 196 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 UBA5Q9GZZ9 404 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 ZDHHC9Q9Y397 364 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 CLIC4Q9Y696 253 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 ATG9AQ7Z3C6 839 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 TRIM47Q96LD4 638 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 KIDINS220Q9ULH0 1771 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 SPHKAPQ2M3C7 1700 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 FAM196AQ6ZSG2 479 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 TGFBRAP1Q8WUH2 860 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 C6orf50Q9HD87 102 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 INCENPQ9NQS7 918 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 SERTAD1Q9UHV2 236 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 N4BP3O15049 544 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 LETM2Q2VYF4 491 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 KIF18AQ8NI77 898 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 MROH1Q8NDA8 1641 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 GJB4Q9NTQ9 266 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 RFX5P48382 616 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-201ENST00000314191 NUP88Q99567 741 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-201ENST00000314191 RBM28Q9NW13 759 aaKnown RBP7.07□□□□□ -1.28
PRKDC-201ENST00000314191 SNW1Q13573 536 aaKnown RBP7.07□□□□□ -1.28
PRKDC-201ENST00000314191 CCDC178Q5BJE1 867 aa7.07□□□□□ -1.28
PRKDC-201ENST00000314191 A0A087WWV3 80 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 UBE4AQ14139 1066 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 MYO3AQ8NEV4 1616 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 RABL6Q3YEC7 729 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 RAB34Q9BZG1 259 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 SPATA31D1Q6ZQQ2 1576 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 ZNF202O95125 648 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 FBXO18Q8NFZ0 1043 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 PALLDQ8WX93 1383 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 CEP170BQ9Y4F5 1589 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-201ENST00000314191 UBXN4Q92575 508 aa7.06□□□□□ -1.28
PRKDC-201ENST00000314191 KCNH3Q9ULD8 1083 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms