RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 RPS8P62241 208 aaKnown RBP9.3□□□□□ -0.92
VPS41-202ENST00000310301 ZEB2O60315 1214 aa9.3□□□□□ -0.92
VPS41-202ENST00000310301 USP48Q86UV5 1035 aa9.3□□□□□ -0.92
VPS41-202ENST00000310301 CNPY2Q9Y2B0 182 aa9.3□□□□□ -0.92
VPS41-202ENST00000310301 MST1RQ04912 1400 aa9.3□□□□□ -0.92
VPS41-202ENST00000310301 KIF20AO95235 890 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 EHMT1Q9H9B1 1298 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 DENND2AQ9ULE3 1009 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 HMGB1P09429 215 aaKnown RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 FAM200AQ8TCP9 573 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 PIGBQ92521 554 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 RRAGDQ9NQL2 400 aaPredicted RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 ARHGAP23Q9P227 1491 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 LDHBP07195 334 aaKnown RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 CTNNA2P26232 953 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 DCAF15Q66K64 600 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 FNBP4Q8N3X1 1017 aaPredicted RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 NAP1L3Q99457 506 aaPredicted RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 CSADQ9Y600 493 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 CROCC2H7BZ55 1655 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 CTAGE9A4FU28 777 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 ZSCAN22P10073 491 aaPredicted RBP9.29□□□□□ -0.92
VPS41-202ENST00000310301 BOLA2Q9H3K6 86 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.29□□□□□ -0.92
VPS41-202ENST00000310301 LRRC7Q96NW7 1537 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 CCDC129Q6ZRS4 1044 aa9.29□□□□□ -0.92
VPS41-202ENST00000310301 A0A1B0GUA9 196 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 KCNQ2O43526 872 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 PDE4BQ07343 736 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 SSRP1Q08945 709 aaKnown RBP9.28□□□□□ -0.92
VPS41-202ENST00000310301 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 DEFB132Q7Z7B7 95 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 ARHGAP45Q92619 1136 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 SELENOSQ9BQE4 189 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 NAPBQ9H115 298 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 ERVV-1B6SEH8 477 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 F6X3S4 739 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 PPEF1O14829 653 aaPredicted RBP9.28□□□□□ -0.92
VPS41-202ENST00000310301 TUBB4AP04350 444 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 SYT1P21579 422 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 PTGS1P23219 599 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 HIBADHP31937 336 aaKnown RBP9.28□□□□□ -0.92
VPS41-202ENST00000310301 PPP1R14CQ8TAE6 165 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 ABT1Q9ULW3 272 aaKnown RBP9.28□□□□□ -0.92
VPS41-202ENST00000310301 N4BP3O15049 544 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 U2AF2P26368 475 aaKnown RBP eCLIP9.28□□□□□ -0.921e-8■■■□□ 17.7
VPS41-202ENST00000310301 EZH2Q15910 746 aaKnown RBP9.28□□□□□ -0.92
VPS41-202ENST00000310301 CCDC82Q8N4S0 544 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 NARFQ9UHQ1 456 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 MAP3K15Q6ZN16 1313 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 IGHDP01880 384 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 RC3H1Q5TC82 1133 aaKnown RBP9.28□□□□□ -0.92
VPS41-202ENST00000310301 SSH1Q8WYL5 1049 aa9.28□□□□□ -0.92
VPS41-202ENST00000310301 PUF60Q9UHX1 559 aaKnown RBP9.28□□□□□ -0.92
VPS41-202ENST00000310301 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.28□□□□□ -0.922e-7■■■□□ 15.1
VPS41-202ENST00000310301 SYT10Q6XYQ8 523 aa9.27□□□□□ -0.92
VPS41-202ENST00000310301 CPLX4Q7Z7G2 160 aa9.27□□□□□ -0.92
VPS41-202ENST00000310301 FAM114A1Q8IWE2 563 aa9.27□□□□□ -0.92
VPS41-202ENST00000310301 AOPEPQ8N6M6 819 aa9.27□□□□□ -0.92
VPS41-202ENST00000310301 DNAJC25Q9H1X3 360 aa9.27□□□□□ -0.92
VPS41-202ENST00000310301 TMOD4Q9NZQ9 345 aa9.27□□□□□ -0.92
VPS41-202ENST00000310301 KDM5AP29375 1690 aaKnown RBP9.27□□□□□ -0.92
VPS41-202ENST00000310301 GOLGA8BA8MQT2 603 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 PABPC4Q13310 644 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS41-202ENST00000310301 CCDC40Q4G0X9 1142 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 CCDC102BQ68D86 513 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 NAA16Q6N069 864 aaPredicted RBP9.27□□□□□ -0.93
VPS41-202ENST00000310301 TMX3Q96JJ7 454 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 RHOXF2BP0C7M4 288 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 HSP90AA4PQ58FG1 418 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 BMP2KLQ5H9B9 411 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 FAM76AQ8TAV0 307 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 RHOXF2Q9BQY4 288 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 CCDC196A0A1B0GTZ2 297 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 MED14O60244 1454 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 AKR1B10O60218 316 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 IFI16Q16666 785 aaKnown RBP9.27□□□□□ -0.93
VPS41-202ENST00000310301 TTC6Q86TZ1 520 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 FAM89AQ96GI7 184 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 DDX23Q9BUQ8 820 aaKnown RBP9.27□□□□□ -0.93
VPS41-202ENST00000310301 NRXN1Q9ULB1 1477 aa9.27□□□□□ -0.93
VPS41-202ENST00000310301 FERP16591 822 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 CYLC1P35663 651 aaPredicted RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 CLNS1AP54105 237 aaKnown RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 KANK3Q6NY19 840 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 HDXQ7Z353 690 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 ARMC9Q7Z3E5 817 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 IQCA1Q86XH1 822 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 SLC12A7Q9Y666 1083 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 IKBKGQ9Y6K9 419 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 TECPR2O15040 1411 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
VPS41-202ENST00000310301 CUL5Q93034 780 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 CAPZA3Q96KX2 299 aa9.26□□□□□ -0.93
VPS41-202ENST00000310301 SEC63Q9UGP8 760 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms