RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 GIMAP6Q6P9H5 292 aa23.56■■□□□ 1.36
SSH3-202ENST00000308298 APOA5Q6Q788 366 aa23.56■■□□□ 1.36
SSH3-202ENST00000308298 FAM196AQ6ZSG2 479 aa23.56■■□□□ 1.36
SSH3-202ENST00000308298 ADGRA1Q86SQ6 560 aa23.56■■□□□ 1.36
SSH3-202ENST00000308298 IGDCC4Q8TDY8 1250 aa23.56■■□□□ 1.36
SSH3-202ENST00000308298 PGBD1Q96JS3 809 aa23.56■■□□□ 1.36
SSH3-202ENST00000308298 KRT23Q9C075 422 aa23.56■■□□□ 1.36
SSH3-202ENST00000308298 METAP2P50579 478 aaKnown RBP eCLIP23.55■■□□□ 1.36
SSH3-202ENST00000308298 MFSD6Q6ZSS7 791 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 STAG1Q8WVM7 1258 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 ZNF396Q96N95 335 aaPredicted RBP23.55■■□□□ 1.36
SSH3-202ENST00000308298 FUCA2Q9BTY2 467 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
SSH3-202ENST00000308298 UBR3Q6ZT12 1888 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 MAGEB6P1A0A0J9YX57 407 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 NPHP1O15259 732 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 SGMS1Q86VZ5 419 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 C8orf76Q96K31 380 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 NUP62CLQ9H1M0 184 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 LY9Q9HBG7 655 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 INCENPQ9NQS7 918 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 ECM29Q5VYK3 1845 aa23.55■■□□□ 1.36
SSH3-202ENST00000308298 KDM4AO75164 1064 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 TM4SF1P30408 202 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 TMEM67Q5HYA8 995 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 ZSWIM5Q9P217 1185 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 TACC3Q9Y6A5 838 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 PDS5AQ29RF7 1337 aaKnown RBP23.54■■□□□ 1.36
SSH3-202ENST00000308298 KLRK1P26718 216 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 LIFRP42702 1097 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 UVSSAQ2YD98 709 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 DDX19AQ9NUU7 478 aaKnown RBP23.54■■□□□ 1.36
SSH3-202ENST00000308298 RCOR1Q9UKL0 485 aa23.54■■□□□ 1.36
SSH3-202ENST00000308298 MAST2Q6P0Q8 1798 aa23.53■■□□□ 1.36
SSH3-202ENST00000308298 CDKL5O76039 1030 aa23.53■■□□□ 1.36
SSH3-202ENST00000308298 NFXL1Q6ZNB6 911 aa23.53■■□□□ 1.36
SSH3-202ENST00000308298 ILDR1Q86SU0 546 aaPredicted RBP23.53■■□□□ 1.36
SSH3-202ENST00000308298 BICD2Q8TD16 824 aa23.53■■□□□ 1.36
SSH3-202ENST00000308298 SENP2Q9HC62 589 aa23.53■■□□□ 1.36
SSH3-202ENST00000308298 DACT1Q9NYF0 836 aa23.53■■□□□ 1.36
SSH3-202ENST00000308298 ESPNB1AK53 854 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 ZBTB43O43298 467 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 ADRA2BP18089 450 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 RGS22Q8NE09 1264 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 FBXO18Q8NFZ0 1043 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 LRRC4BQ9NT99 713 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 CCDC88AQ3V6T2 1871 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 IFIT3O14879 490 aaKnown RBP23.52■■□□□ 1.36
SSH3-202ENST00000308298 HIBADHP31937 336 aaKnown RBP23.52■■□□□ 1.36
SSH3-202ENST00000308298 CEBPZQ03701 1054 aaKnown RBP23.52■■□□□ 1.36
SSH3-202ENST00000308298 NFIXQ14938 502 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 CPLX2Q6PUV4 134 aaKnown RBP23.52■■□□□ 1.36
SSH3-202ENST00000308298 USP28Q96RU2 1077 aa23.52■■□□□ 1.36
SSH3-202ENST00000308298 RIOK1Q9BRS2 568 aaKnown RBP23.52■■□□□ 1.36
SSH3-202ENST00000308298 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
SSH3-202ENST00000308298 MAP3K11Q16584 847 aa23.51■■□□□ 1.35
SSH3-202ENST00000308298 MICU3Q86XE3 530 aa23.51■■□□□ 1.35
SSH3-202ENST00000308298 BAZ2AQ9UIF9 1905 aaKnown RBP23.51■■□□□ 1.35
SSH3-202ENST00000308298 PPARAQ07869 468 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 SDR42E1Q8WUS8 393 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 FTOQ9C0B1 505 aaKnown RBP eCLIP23.5■■□□□ 1.35
SSH3-202ENST00000308298 RXRAP19793 462 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 RRP12Q5JTH9 1297 aaKnown RBP23.5■■□□□ 1.35
SSH3-202ENST00000308298 OTUD7BQ6GQQ9 843 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 CNBD1Q8NA66 436 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 MTA3Q9BTC8 594 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 TFCP2L1Q9NZI6 479 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 ANAPC4Q9UJX5 808 aa23.5■■□□□ 1.35
SSH3-202ENST00000308298 CCDC69A6NI79 296 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 GOLGA8AA7E2F4 631 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 CCDC192P0DO97 292 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 CDC27P30260 824 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 SART3Q15020 963 aaKnown RBP23.49■■□□□ 1.35
SSH3-202ENST00000308298 TNMDQ9H2S6 317 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 CLSTN2Q9H4D0 955 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 TOMM22Q9NS69 142 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 HS1BP3Q53T59 392 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 ZNF384Q8TF68 577 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 SLC12A7Q9Y666 1083 aa23.49■■□□□ 1.35
SSH3-202ENST00000308298 NID2Q14112 1375 aa23.48■■□□□ 1.35
SSH3-202ENST00000308298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.48■■□□□ 1.35
SSH3-202ENST00000308298 NR1I2O75469 434 aa23.48■■□□□ 1.35
SSH3-202ENST00000308298 CAMK4Q16566 473 aa23.48■■□□□ 1.35
SSH3-202ENST00000308298 BRAPQ7Z569 592 aa23.48■■□□□ 1.35
SSH3-202ENST00000308298 BRWD3Q6RI45 1802 aa23.48■■□□□ 1.35
SSH3-202ENST00000308298 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 ZBTB22O15209 634 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 DYNLL1P63167 89 aaKnown RBP23.47■■□□□ 1.35
SSH3-202ENST00000308298 GRAPQ13588 217 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 GRAPLQ8TC17 118 aaPredicted RBP23.47■■□□□ 1.35
SSH3-202ENST00000308298 NSUN4Q96CB9 384 aaKnown RBP23.47■■□□□ 1.35
SSH3-202ENST00000308298 BRIP1Q9BX63 1249 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 IRS2Q9Y4H2 1338 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 NTRK3Q16288 839 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 SYNE3Q6ZMZ3 975 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 RBM43Q6ZSC3 357 aaKnown RBP23.47■■□□□ 1.35
SSH3-202ENST00000308298 CCDC144CPQ8IYA2 1237 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 ALG1Q9BT22 464 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 RTEL1Q9NZ71 1219 aa23.47■■□□□ 1.35
SSH3-202ENST00000308298 DUOX1Q9NRD9 1551 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms