RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 PHKBQ93100 1093 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 NEURL4Q96JN8 1562 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 KIF5CO60282 957 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 BCAMP50895 628 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 CACNA2D4Q7Z3S7 1137 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 TTC6Q86TZ1 520 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 OGFOD1Q8N543 542 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
PCDHGC3-201ENST00000308177 YEATS4O95619 227 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 PHKA1P46020 1223 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 NOLC1Q14978 699 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 NLRP10Q86W26 655 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 DIS3L2Q8IYB7 885 aaKnown RBP13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 RRP36Q96EU6 259 aaKnown RBP13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 H7C1W4 665 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 SKILP12757 684 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 SPA17Q15506 151 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 PDCL3Q9H2J4 239 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 TECPR2O15040 1411 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 EHMT1Q9H9B1 1298 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 CYP21A2P08686 494 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 GYG1P46976 350 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 KRT40Q6A162 431 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
PCDHGC3-201ENST00000308177 ELP1O95163 1332 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 MYO1BO43795 1136 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 PFKFB2O60825 505 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 GNA11P29992 359 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 TRIM47Q96LD4 638 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 MCM7P33993 719 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 CUL4AQ13619 759 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 UBE3CQ15386 1083 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 IFNL3Q8IZI9 196 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 ERLIN1O75477 346 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 CHRNDQ07001 517 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 PPP2R5BQ15173 497 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 KIF4BQ2VIQ3 1234 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 PDCL2Q8N4E4 241 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 HDAC9Q9UKV0 1011 aa13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC3-201ENST00000308177 SPAG1Q07617 926 aa13.02□□□□□ -0.32
PCDHGC3-201ENST00000308177 ADCY9O60503 1353 aa13.02□□□□□ -0.32
PCDHGC3-201ENST00000308177 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
PCDHGC3-201ENST00000308177 FAM114A1Q8IWE2 563 aa13.02□□□□□ -0.33
PCDHGC3-201ENST00000308177 CHAMP1Q96JM3 812 aa13.02□□□□□ -0.33
PCDHGC3-201ENST00000308177 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
PCDHGC3-201ENST00000308177 NRKQ7Z2Y5 1582 aa13.02□□□□□ -0.33
PCDHGC3-201ENST00000308177 DIP2BQ9P265 1576 aa13.02□□□□□ -0.33
PCDHGC3-201ENST00000308177 C1orf167Q5SNV9 1468 aa13.02□□□□□ -0.33
PCDHGC3-201ENST00000308177 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 TRAF1Q13077 416 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 IQUBQ8NA54 791 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 CTAGE1Q96RT6 745 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 SEPT11Q9NVA2 429 aaKnown RBP13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 PPARAQ07869 468 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 ZNF174Q15697 407 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 CASQ1P31415 396 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 DTHD1Q6ZMT9 781 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 MAST3O60307 1309 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 PSMA7O14818 248 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 KCNH3Q9ULD8 1083 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 MROH2AA6NES4 1674 aa13.01□□□□□ -0.33
PCDHGC3-201ENST00000308177 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 USP17L12C9JPN9 530 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 USP17L21D6R901 530 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 TNNI2P48788 182 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 CDR1P51861 262 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 PTGS1P23219 599 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 ASIC1P78348 528 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 IQCEQ6IPM2 695 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 MYO6Q9UM54 1294 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 ADD1P35611 737 aaKnown RBP13□□□□□ -0.33
PCDHGC3-201ENST00000308177 UBE4AQ14139 1066 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 IFNKQ9P0W0 207 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 ERMNQ8TAM6 284 aa13□□□□□ -0.33
PCDHGC3-201ENST00000308177 RRP9O43818 475 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 PDIA3P30101 505 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 CEP135Q66GS9 1140 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 SDR42E1Q8WUS8 393 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 PPLO60437 1756 aa12.99□□□□□ -0.33
PCDHGC3-201ENST00000308177 CUTAO60888 179 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms