RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GSG1L2A8MUP6 293 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 ATP2B4P23634 1241 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 GJB2P29033 226 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 EVCP57679 992 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 TBC1D10CQ8IV04 446 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 ZNF384Q8TF68 577 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 LRRC2Q9BYS8 371 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 RRAGCQ9HB90 399 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 DLEC1Q9Y238 1755 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 TRAK2O60296 914 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 PFKFB2O60825 505 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 APPP05067 770 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 SYT1P21579 422 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 MCM5P33992 734 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 TDRD7Q8NHU6 1098 aaKnown RBP14.04□□□□□ -0.16
TRIM40-205ENST00000307859 RIOK1Q9BRS2 568 aaKnown RBP14.04□□□□□ -0.16
TRIM40-205ENST00000307859 NAPBQ9H115 298 aa14.04□□□□□ -0.16
TRIM40-205ENST00000307859 ECM29Q5VYK3 1845 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 NAV1Q8NEY1 1877 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 MAGEB6P1A0A0J9YX57 407 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 STX6O43752 255 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 MMP10P09238 476 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
TRIM40-205ENST00000307859 FGD1P98174 961 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 NAA16Q6N069 864 aaPredicted RBP14.03□□□□□ -0.16
TRIM40-205ENST00000307859 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 RALYLQ86SE5 291 aaKnown RBP14.03□□□□□ -0.16
TRIM40-205ENST00000307859 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 NSUN4Q96CB9 384 aaKnown RBP14.03□□□□□ -0.16
TRIM40-205ENST00000307859 SLC4A4Q9Y6R1 1079 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 FOCADQ5VW36 1801 aa14.03□□□□□ -0.16
TRIM40-205ENST00000307859 PRC1O43663 620 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 PRKAB2O43741 272 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 UFL1O94874 794 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 ZSCAN22P10073 491 aaPredicted RBP14.02□□□□□ -0.16
TRIM40-205ENST00000307859 SRGNP10124 158 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 ANTXR2P58335 489 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 GSE1Q14687 1217 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 ZNF274Q96GC6 653 aaPredicted RBP14.02□□□□□ -0.16
TRIM40-205ENST00000307859 NACAP1Q9BZK3 213 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 GGA1Q9UJY5 639 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 PARP3Q9Y6F1 533 aa14.02□□□□□ -0.16
TRIM40-205ENST00000307859 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 NPR1P16066 1061 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 MECOMQ03112 1051 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 APOBRQ0VD83 1088 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 SCRN1Q12765 414 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 TRDNQ13061 729 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 STK3Q13188 491 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 SKOR2Q2VWA4 1001 aaPredicted RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 MCTP1Q6DN14 999 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 SP8Q8IXZ3 490 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 WDR66Q8TBY9 1149 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 LLPHQ9BRT6 129 aaKnown RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 NSFL1CQ9UNZ2 370 aaKnown RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 ZC3H4Q9UPT8 1303 aaKnown RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 PRDX5P30044 214 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 PDE6BP35913 854 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 FOXD4L5Q5VV16 416 aaPredicted RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 SPTY2D1Q68D10 685 aaPredicted RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 CHST3Q7LGC8 479 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 SLX4Q8IY92 1834 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 SMARCC2Q8TAQ2 1214 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 TBC1D16Q8TBP0 767 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 FOXD4L4Q8WXT5 416 aaPredicted RBP14.01□□□□□ -0.17
TRIM40-205ENST00000307859 MTMR6Q9Y217 621 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
TRIM40-205ENST00000307859 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
TRIM40-205ENST00000307859 NEDD4P46934 1319 aa14□□□□□ -0.17
TRIM40-205ENST00000307859 F13A1P00488 732 aa14□□□□□ -0.17
TRIM40-205ENST00000307859 IL1R1P14778 569 aa14□□□□□ -0.17
TRIM40-205ENST00000307859 PDCP20941 246 aa14□□□□□ -0.17
TRIM40-205ENST00000307859 PDIA3P30101 505 aaKnown RBP14□□□□□ -0.17
TRIM40-205ENST00000307859 TDO2P48775 406 aa14□□□□□ -0.17
TRIM40-205ENST00000307859 STAG1Q8WVM7 1258 aa14□□□□□ -0.17
TRIM40-205ENST00000307859 GPR101Q96P66 508 aaPredicted RBP14□□□□□ -0.17
TRIM40-205ENST00000307859 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
TRIM40-205ENST00000307859 DDX60LQ5H9U9 1706 aaKnown RBP13.99□□□□□ -0.17
TRIM40-205ENST00000307859 DPEP1P16444 411 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 DEKP35659 375 aaKnown RBP13.99□□□□□ -0.17
TRIM40-205ENST00000307859 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 GIMAP6Q6P9H5 292 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 CYB5R4Q7L1T6 521 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 CD209Q9NNX6 404 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 RNF181Q9P0P0 153 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 POLLQ9UGP5 575 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 ANAPC4Q9UJX5 808 aa13.99□□□□□ -0.17
TRIM40-205ENST00000307859 MYH6P13533 1939 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 B4E1Z4 1266 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 ALDH1B1P30837 517 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
TRIM40-205ENST00000307859 NSUN7Q8NE18 718 aaKnown RBP13.98□□□□□ -0.17
TRIM40-205ENST00000307859 NKX2-3Q8TAU0 364 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 SDR42E1Q8WUS8 393 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms