RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ABT1Q9ULW3 272 aaKnown RBP13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 MYH1P12882 1939 aa13.35□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TCP10L2B9ZVM9 353 aa13.35□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 BAG3O95817 575 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TSHZ3Q63HK5 1081 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TMED8Q6PL24 325 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 MAGEB6Q8N7X4 407 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 C2orf69Q8N8R5 385 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 FAM163AQ96GL9 167 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 GBA2Q9HCG7 927 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 OTOFQ9HC10 1997 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 AOX1Q06278 1338 aa13.34□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 PLCG2P16885 1265 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CYP7A1P22680 504 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CACNB3P54284 484 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 NUCB1Q02818 461 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 RASA3Q14644 834 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CDC42EP5Q6NZY7 148 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CERS3Q8IU89 383 aa13.33□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 GPR75-ASB3A0A0A6YYF3 556 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 LRRFIP1Q32MZ4 808 aaKnown RBP13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 SUPT20HL1Q3ZLR7 823 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PRAMEF18Q5VWM3 479 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 DLK2Q6UY11 383 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 FAM83AQ86UY5 434 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 HOOK2Q96ED9 719 aa13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 MYH8P13535 1937 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PDE6AP16499 860 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PDE1AP54750 535 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 FKBP1BP68106 108 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 HTRA3P83110 453 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 TCP10Q12799 353 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PICALMQ13492 652 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 SLC9C2Q5TAH2 1124 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CST9Q5W186 159 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ARMC9Q7Z3E5 817 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 TEX11Q8IYF3 940 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 TLL2Q9Y6L7 1015 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PPP1R12BO60237 982 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 FAM151AQ8WW52 585 aa13.3□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CNTNAP1P78357 1384 aa13.3□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 BAZ2AQ9UIF9 1905 aaKnown RBP13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 SSC5DA1L4H1 1573 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ENTPD3O75355 529 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ADD2P35612 726 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 RGS3P49796 1198 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 HUNKP57058 714 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 RHBDL3P58872 404 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 NFIAQ12857 509 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PRKG1Q13976 671 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 NBPF12Q5TAG4 269 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ADGRA1Q86SQ6 560 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 STAP2Q9UGK3 403 aa13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 DDX60LQ5H9U9 1706 aaKnown RBP13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 LAMB1P07942 1786 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 RASSF10A6NK89 507 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 ECE1P42892 770 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 USP5P45974 858 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 IREB2P48200 963 aaKnown RBP13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 PPP4CP60510 307 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 DCAF15Q66K64 600 aa13.28□□□□□ -0.28
CSPG4P2Y-201ENST00000306853 SAPCD2Q86UD0 394 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms