RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TIAM2Q8IVF5 1701 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 H3BQV1 296 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 SEMA3EO15041 775 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 NPHP1O15259 732 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 DYNLL1P63167 89 aaKnown RBP7.69□□□□□ -1.18
USP47-201ENST00000305481 GRAPQ13588 217 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 AKNAD1Q5T1N1 836 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 IFFO2Q5TF58 517 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 ILDR1Q86SU0 546 aaPredicted RBP7.69□□□□□ -1.18
USP47-201ENST00000305481 GRAPLQ8TC17 118 aaPredicted RBP7.69□□□□□ -1.18
USP47-201ENST00000305481 LY9Q9HBG7 655 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 ELP1O95163 1332 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 MAGEB6P1A0A0J9YX57 407 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 CRY2Q49AN0 593 aa7.69□□□□□ -1.18
USP47-201ENST00000305481 LEO1Q8WVC0 666 aaPredicted RBP7.69□□□□□ -1.18
USP47-201ENST00000305481 NSUN4Q96CB9 384 aaKnown RBP7.69□□□□□ -1.18
USP47-201ENST00000305481 PDS5AQ29RF7 1337 aaKnown RBP7.68□□□□□ -1.18
USP47-201ENST00000305481 KDM4AO75164 1064 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 TDO2P48775 406 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 NASPP49321 788 aaPredicted RBP7.68□□□□□ -1.18
USP47-201ENST00000305481 GUCY1B3Q02153 619 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 MECOMQ03112 1051 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 DDR1Q08345 913 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 CSPP1Q1MSJ5 1256 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 STAG1Q8WVM7 1258 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 SERPINB2P05120 415 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 RXRAP19793 462 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 PRDX5P30044 214 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 CDC27P30260 824 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 TXNRD1Q16881 649 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 APOA5Q6Q788 366 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 SYAP1Q96A49 352 aaPredicted RBP7.68□□□□□ -1.18
USP47-201ENST00000305481 TMEM87BQ96K49 555 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 NACAP1Q9BZK3 213 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 ZSCAN16Q9H4T2 348 aaPredicted RBP7.68□□□□□ -1.18
USP47-201ENST00000305481 GJB4Q9NTQ9 266 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 FAM217BQ9NTX9 383 aaPredicted RBP7.68□□□□□ -1.18
USP47-201ENST00000305481 CHD4Q14839 1912 aa7.68□□□□□ -1.18
USP47-201ENST00000305481 PPARAQ07869 468 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 PDE4CQ08493 712 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 CCDC183Q5T5S1 534 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 OTUD7BQ6GQQ9 843 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 MFSD6Q6ZSS7 791 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 SGMS1Q86VZ5 419 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 STK11IPQ8N1F8 1099 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 PGBD1Q96JS3 809 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 FTOQ9C0B1 505 aaKnown RBP eCLIP7.67□□□□□ -1.18
USP47-201ENST00000305481 SCAND2PQ9GZW5 306 aaPredicted RBP7.67□□□□□ -1.18
USP47-201ENST00000305481 JAG2Q9Y219 1238 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 ZBTB22O15209 634 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 LIG1P18858 919 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 SPATA32Q96LK8 384 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 GPR101Q96P66 508 aaPredicted RBP7.67□□□□□ -1.18
USP47-201ENST00000305481 ANKIB1Q9P2G1 1089 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 CYP2D7A0A087X1C5 515 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 POLRMTO00411 1230 aaKnown RBP7.67□□□□□ -1.18
USP47-201ENST00000305481 DHX16O60231 1041 aaKnown RBP7.67□□□□□ -1.18
USP47-201ENST00000305481 LIFRP42702 1097 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 EVX2Q03828 476 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 TMEM67Q5HYA8 995 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 MYL10Q9BUA6 226 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 CNNM2Q9H8M5 875 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 ANAPC4Q9UJX5 808 aa7.67□□□□□ -1.18
USP47-201ENST00000305481 GPSM2P81274 684 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 CHAF1AQ13111 956 aaPredicted RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 NTRK3Q16288 839 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 CHMP4CQ96CF2 233 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 ZKSCAN3Q9BRR0 538 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 KRT23Q9C075 422 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 ORC3Q9UBD5 711 aaPredicted RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 KIF3AQ9Y496 699 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 MYH13Q9UKX3 1938 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 MINDY4BA8MYZ0 360 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 IFIT3O14879 490 aaKnown RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 METAP2P50579 478 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP47-201ENST00000305481 ZNF827Q17R98 1081 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 RRP12Q5JTH9 1297 aaKnown RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 MICU3Q86XE3 530 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 CCDC144CPQ8IYA2 1237 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 FBXO18Q8NFZ0 1043 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 AIFM3Q96NN9 605 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 BRIP1Q9BX63 1249 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 LEMD3Q9Y2U8 911 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 XDHP47989 1333 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 MYH15Q9Y2K3 1946 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 UBE2Q2LH0YL09 131 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 CPLX1O14810 134 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 RANBP6O60518 1105 aaKnown RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 GRIK5Q16478 980 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 CTR9Q6PD62 1173 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 TDRD7Q8NHU6 1098 aaKnown RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 RPGRQ92834 1020 aaKnown RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 USP28Q96RU2 1077 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 PPP1R9BQ96SB3 815 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 FUCA2Q9BTY2 467 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 TSPY26PQ9H489 355 aa7.66□□□□□ -1.18
USP47-201ENST00000305481 AATFQ9NY61 560 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP47-201ENST00000305481 BAZ2AQ9UIF9 1905 aaKnown RBP7.66□□□□□ -1.18
USP47-201ENST00000305481 KLRG2A4D1S0 409 aaPredicted RBP7.65□□□□□ -1.18
USP47-201ENST00000305481 ZBTB43O43298 467 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms