RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 ARID5BQ14865 1188 aa16.21■□□□□ 0.19
CCT2-201ENST00000299300 PTPAQ15257 358 aa16.21■□□□□ 0.19
CCT2-201ENST00000299300 APOA5Q6Q788 366 aa16.21■□□□□ 0.19
CCT2-201ENST00000299300 SYNE3Q6ZMZ3 975 aa16.21■□□□□ 0.19
CCT2-201ENST00000299300 HPSEQ9Y251 543 aa16.21■□□□□ 0.19
CCT2-201ENST00000299300 COL14A1Q05707 1796 aaKnown RBP16.21■□□□□ 0.19
CCT2-201ENST00000299300 MROH5Q6ZUA9 1318 aa16.21■□□□□ 0.19
CCT2-201ENST00000299300 WDHD1O75717 1129 aaPredicted RBP16.21■□□□□ 0.18
CCT2-201ENST00000299300 DPCR1Q3MIW9 517 aa16.21■□□□□ 0.18
CCT2-201ENST00000299300 NYAP1Q6ZVC0 841 aa16.21■□□□□ 0.18
CCT2-201ENST00000299300 RAB11FIP4Q86YS3 637 aa16.21■□□□□ 0.18
CCT2-201ENST00000299300 LPIN2Q92539 896 aa16.21■□□□□ 0.18
CCT2-201ENST00000299300 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.18
CCT2-201ENST00000299300 ALG1Q9BT22 464 aa16.21■□□□□ 0.18
CCT2-201ENST00000299300 FAM217BQ9NTX9 383 aaPredicted RBP16.21■□□□□ 0.18
CCT2-201ENST00000299300 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.18
CCT2-201ENST00000299300 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 STK36Q9NRP7 1315 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 CCDC69A6NI79 296 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
CCT2-201ENST00000299300 PFKFB1P16118 471 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.182e-7■■□□□ 12.8
CCT2-201ENST00000299300 CDC27P30260 824 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 METAP2P50579 478 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCT2-201ENST00000299300 GSDMDP57764 484 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 NCAPHQ15003 741 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 PUM3Q15397 648 aaKnown RBP16.2■□□□□ 0.18
CCT2-201ENST00000299300 C16orf45Q96MC5 204 aaPredicted RBP16.2■□□□□ 0.18
CCT2-201ENST00000299300 LY9Q9HBG7 655 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 TUBE1Q9UJT0 475 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 ZBTB1Q9Y2K1 713 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 RREB1Q92766 1687 aa16.2■□□□□ 0.18
CCT2-201ENST00000299300 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 IL6STP40189 918 aaPredicted RBP16.19■□□□□ 0.18
CCT2-201ENST00000299300 LIFRP42702 1097 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 KRT40Q6A162 431 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 MAP3K14Q99558 947 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
CCT2-201ENST00000299300 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 TPD52L1Q16890 204 aaPredicted RBP16.19■□□□□ 0.18
CCT2-201ENST00000299300 VPS37DQ86XT2 251 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 LAMB2P55268 1798 aa16.19■□□□□ 0.18
CCT2-201ENST00000299300 B4E1Z4 1266 aa16.18■□□□□ 0.18
CCT2-201ENST00000299300 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
CCT2-201ENST00000299300 IKBKBO14920 756 aa16.18■□□□□ 0.18
CCT2-201ENST00000299300 IDH1O75874 414 aaKnown RBP16.18■□□□□ 0.18
CCT2-201ENST00000299300 SKILP12757 684 aa16.18■□□□□ 0.18
CCT2-201ENST00000299300 CPLX2Q6PUV4 134 aaKnown RBP16.18■□□□□ 0.18
CCT2-201ENST00000299300 EPB41L4AQ9HCS5 686 aaPredicted RBP16.18■□□□□ 0.18
CCT2-201ENST00000299300 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.18■□□□□ 0.18
CCT2-201ENST00000299300 PHLPP1O60346 1717 aa16.18■□□□□ 0.18
CCT2-201ENST00000299300 KCNJ6P48051 423 aa16.18■□□□□ 0.18
CCT2-201ENST00000299300 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
CCT2-201ENST00000299300 CICQ96RK0 1608 aaPredicted RBP16.17■□□□□ 0.18
CCT2-201ENST00000299300 USP27XA6NNY8 438 aa16.17■□□□□ 0.18
CCT2-201ENST00000299300 ZBTB43O43298 467 aa16.17■□□□□ 0.18
CCT2-201ENST00000299300 RANBP6O60518 1105 aaKnown RBP16.17■□□□□ 0.18
CCT2-201ENST00000299300 NCBP1Q09161 790 aaKnown RBP16.17■□□□□ 0.18
CCT2-201ENST00000299300 DHX8Q14562 1220 aaKnown RBP16.17■□□□□ 0.18
CCT2-201ENST00000299300 RESP18Q5W5W9 173 aa16.17■□□□□ 0.18
CCT2-201ENST00000299300 SHC4Q6S5L8 630 aa16.17■□□□□ 0.18
CCT2-201ENST00000299300 ELOA2Q8IYF1 753 aaPredicted RBP16.17■□□□□ 0.18
CCT2-201ENST00000299300 IFNL3Q8IZI9 196 aa16.17■□□□□ 0.18
CCT2-201ENST00000299300 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
CCT2-201ENST00000299300 CEP135Q66GS9 1140 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
CCT2-201ENST00000299300 JMYQ8N9B5 988 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCT2-201ENST00000299300 HSD3B7Q9H2F3 369 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 DOT1LQ8TEK3 1739 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.16■□□□□ 0.18
CCT2-201ENST00000299300 FILIP1Q7Z7B0 1213 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
CCT2-201ENST00000299300 PDCL2Q8N4E4 241 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
CCT2-201ENST00000299300 XPO4Q9C0E2 1151 aaKnown RBP16.16■□□□□ 0.18
CCT2-201ENST00000299300 PNPLA7Q6ZV29 1317 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 GOLGA8AA7E2F4 631 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 GSG1L2A8MUP6 293 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 CUTAO60888 179 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 FMNL1O95466 1100 aaPredicted RBP16.15■□□□□ 0.18
CCT2-201ENST00000299300 APPP05067 770 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 SLC5A1P13866 664 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 IARSP41252 1262 aaKnown RBP16.15■□□□□ 0.18
CCT2-201ENST00000299300 SYKP43405 635 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 CCDC150Q8NCX0 1101 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 BTG4Q9NY30 223 aa16.15■□□□□ 0.18
CCT2-201ENST00000299300 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.18
CCT2-201ENST00000299300 IFNAR1P17181 557 aa16.14■□□□□ 0.17
CCT2-201ENST00000299300 MARCKSP29966 332 aaPredicted RBP16.14■□□□□ 0.17
CCT2-201ENST00000299300 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
CCT2-201ENST00000299300 MAP3K12Q12852 859 aa16.14■□□□□ 0.17
CCT2-201ENST00000299300 RASGRF1Q13972 1273 aa16.14■□□□□ 0.17
CCT2-201ENST00000299300 ZRSR1Q15695 479 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms