RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 JDP2Q8WYK2 163 aa24.69■■□□□ 1.54
PACSIN3-201ENST00000298838 TM6SF1Q9BZW5 370 aa24.69■■□□□ 1.54
PACSIN3-201ENST00000298838 NAPBQ9H115 298 aa24.69■■□□□ 1.54
PACSIN3-201ENST00000298838 EPB41L4AQ9HCS5 686 aaPredicted RBP24.69■■□□□ 1.54
PACSIN3-201ENST00000298838 GAKO14976 1311 aa24.69■■□□□ 1.54
PACSIN3-201ENST00000298838 PSMA5P28066 241 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 SNX21Q969T3 373 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 JAKMIP1Q96N16 626 aaKnown RBP24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 TDO2P48775 406 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 NEK4P51957 841 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 PPP4CP60510 307 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 ADCK5Q3MIX3 580 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 SDR42E1Q8WUS8 393 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 TAF6LQ9Y6J9 622 aa24.68■■□□□ 1.54
PACSIN3-201ENST00000298838 GPR75-ASB3A0A0A6YYF3 556 aa24.67■■□□□ 1.54
PACSIN3-201ENST00000298838 CASTP20810 708 aaKnown RBP24.67■■□□□ 1.54
PACSIN3-201ENST00000298838 HSCBQ8IWL3 235 aa24.67■■□□□ 1.54
PACSIN3-201ENST00000298838 UPF3BQ9BZI7 483 aaKnown RBP24.67■■□□□ 1.54
PACSIN3-201ENST00000298838 DAXXQ9UER7 740 aaPredicted RBP24.67■■□□□ 1.54
PACSIN3-201ENST00000298838 MYO3BQ8WXR4 1341 aa24.67■■□□□ 1.54
PACSIN3-201ENST00000298838 ZNF213O14771 459 aa24.66■■□□□ 1.54
PACSIN3-201ENST00000298838 BTDP43251 543 aa24.66■■□□□ 1.54
PACSIN3-201ENST00000298838 PLCG2P16885 1265 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 RASSF7Q02833 373 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 GIMAP6Q6P9H5 292 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 KIAA0825Q8IV33 1275 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 TBC1D2Q9BYX2 928 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 DAGLAQ9Y4D2 1042 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 RAD17O75943 681 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 HAND2P61296 217 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 TEKT1Q969V4 418 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 ATP8A2Q9NTI2 1148 aa24.65■■□□□ 1.54
PACSIN3-201ENST00000298838 HHIPL2Q6UWX4 724 aa24.64■■□□□ 1.54
PACSIN3-201ENST00000298838 ZSWIM6Q9HCJ5 1215 aa24.64■■□□□ 1.54
PACSIN3-201ENST00000298838 CYP46A1Q9Y6A2 500 aa24.64■■□□□ 1.54
PACSIN3-201ENST00000298838 BAZ2AQ9UIF9 1905 aaKnown RBP24.64■■□□□ 1.53
PACSIN3-201ENST00000298838 PSMD14O00487 310 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 SCNN1DP51172 638 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 RSBN1LQ6PCB5 846 aaPredicted RBP24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 SH3RF3Q8TEJ3 882 aaPredicted RBP24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 SRCAPQ6ZRS2 3230 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 ADAMTSL1Q8N6G6 1762 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 CDK5RAP2Q96SN8 1893 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 CD2BP2O95400 341 aaKnown RBP24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 VIL1P09327 827 aaKnown RBP24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 HDLBPQ00341 1268 aaKnown RBP24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 BLOC1S2Q6QNY1 142 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 RUFY3Q7L099 469 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 NEK1Q96PY6 1258 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 MRIQ9BWK5 157 aa24.63■■□□□ 1.53
PACSIN3-201ENST00000298838 E7EWF7 191 aa24.62■■□□□ 1.53
PACSIN3-201ENST00000298838 STOX1Q6ZVD7 989 aa24.62■■□□□ 1.53
PACSIN3-201ENST00000298838 CRKP46108 304 aa24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 DCP1AQ9NPI6 582 aaPredicted RBP24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 TIAM2Q8IVF5 1701 aa24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 NAV1Q8NEY1 1877 aa24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 HMGB1P09429 215 aaKnown RBP24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 USP5P45974 858 aa24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 ARHGAP27Q6ZUM4 889 aa24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 SERPINA10Q9UK55 444 aa24.61■■□□□ 1.53
PACSIN3-201ENST00000298838 LAMB1P07942 1786 aa24.6■■□□□ 1.53
PACSIN3-201ENST00000298838 MCM2P49736 904 aa24.6■■□□□ 1.53
PACSIN3-201ENST00000298838 RHBDL3P58872 404 aa24.6■■□□□ 1.53
PACSIN3-201ENST00000298838 CXCL9Q07325 125 aa24.6■■□□□ 1.53
PACSIN3-201ENST00000298838 TEX11Q8IYF3 940 aa24.6■■□□□ 1.53
PACSIN3-201ENST00000298838 ZDHHC15Q96MV8 337 aa24.6■■□□□ 1.53
PACSIN3-201ENST00000298838 FOCADQ5VW36 1801 aa24.59■■□□□ 1.53
PACSIN3-201ENST00000298838 CPA1P15085 419 aa24.59■■□□□ 1.53
PACSIN3-201ENST00000298838 CIAPIN1Q6FI81 312 aa24.59■■□□□ 1.53
PACSIN3-201ENST00000298838 NBPF3Q9H094 633 aa24.59■■□□□ 1.53
PACSIN3-201ENST00000298838 K7ELQ4 463 aaPredicted RBP24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 SOCS7O14512 581 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 RPS6KB1P23443 525 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 SLC4A3P48751 1232 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 TBC1D10CQ8IV04 446 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 AGBL3Q8NEM8 1001 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 TTC14Q96N46 770 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 PDRG1Q9NUG6 133 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 ARPP21Q9UBL0 812 aaPredicted RBP24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 PRELPP51888 382 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 PPARAQ07869 468 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 TNIP1Q15025 636 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 TGFBRAP1Q8WUH2 860 aa24.58■■□□□ 1.53
PACSIN3-201ENST00000298838 DICER1Q9UPY3 1922 aaKnown RBP24.58■■□□□ 1.52
PACSIN3-201ENST00000298838 ECM29Q5VYK3 1845 aa24.58■■□□□ 1.52
PACSIN3-201ENST00000298838 RBM5P52756 815 aaKnown RBP eCLIP24.57■■□□□ 1.52
PACSIN3-201ENST00000298838 TRDNQ13061 729 aa24.57■■□□□ 1.52
PACSIN3-201ENST00000298838 GMLQ99445 158 aa24.57■■□□□ 1.52
PACSIN3-201ENST00000298838 MKRN1Q9UHC7 482 aaKnown RBP24.57■■□□□ 1.52
PACSIN3-201ENST00000298838 HDAC9Q9UKV0 1011 aa24.57■■□□□ 1.52
PACSIN3-201ENST00000298838 MINDY4BA8MYZ0 360 aa24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 LMNB1P20700 586 aa24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 APOBEC3HQ6NTF7 200 aaKnown RBP24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 CTR9Q6PD62 1173 aa24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 RALYLQ86SE5 291 aaKnown RBP24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 OGFOD1Q8N543 542 aa24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 NCOA7Q8NI08 942 aa24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 MCM9Q9NXL9 1143 aa24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 ANAPC4Q9UJX5 808 aa24.56■■□□□ 1.52
PACSIN3-201ENST00000298838 USP17L12C9JPN9 530 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms