RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 PAIP2Q9BPZ3 127 aaKnown RBP18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 VAT1LQ9HCJ6 419 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 MAP3K19Q56UN5 1328 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 FAM173BQ6P4H8 233 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 SYCP3Q8IZU3 236 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 GOLGA6CA6NDK9 693 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 SGSM2O43147 1006 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 GOLGA6DP0CG33 693 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 KRT13P13646 458 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 GOLGA6AQ9NYA3 693 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 CALML3P27482 149 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 SLC9C2Q5TAH2 1124 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 EHMT1Q9H9B1 1298 aa18.57■□□□□ 0.56
SNAPC4-201ENST00000298532 TTC37Q6PGP7 1564 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 NAA25Q14CX7 972 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 GAS2L3Q86XJ1 694 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 KRT24Q2M2I5 525 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 ERMNQ8TAM6 284 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 PHACTR3Q96KR7 559 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 ACTN2P35609 894 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 COPS6Q7L5N1 327 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 PPP1R14CQ8TAE6 165 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 ANO1Q5XXA6 986 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 CRNKL1Q9BZJ0 848 aaKnown RBP18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 SLC4A4Q9Y6R1 1079 aa18.56■□□□□ 0.56
SNAPC4-201ENST00000298532 KRT2P35908 639 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 PPP4R3AQ6IN85 833 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 MTRF1LQ9UGC7 380 aaKnown RBP18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 TLDC2A0PJX2 215 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 SLC27A2O14975 620 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 CALM1P0DP23 149 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 CALM2P0DP24 149 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 CALM3P0DP25 149 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 CYP26C1Q6V0L0 522 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 EYA1Q99502 592 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 IQCGQ9H095 443 aaKnown RBP18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 LACTBP83111 547 aaPredicted RBP18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 ZSCAN26Q16670 478 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 TRPC5Q9UL62 973 aaPredicted RBP18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 NLRP12P59046 1061 aa18.55■□□□□ 0.56
SNAPC4-201ENST00000298532 BAG3O95817 575 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 ARID5AQ03989 594 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 GRIPAP1Q4V328 841 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 TRAPPC3LQ5T215 181 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 DNAI2Q9GZS0 605 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 HDAC9Q9UKV0 1011 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 CEP83Q9Y592 693 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 RTL9Q8NET4 1388 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 ARHGAP25P42331 645 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 GPR161Q8N6U8 529 aaKnown RBP18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 GSTO1P78417 241 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 MXRA7P84157 204 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 ZBTB16Q05516 673 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 RILPL1Q5EBL4 403 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 MLKLQ8NB16 471 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 KCNH3Q9ULD8 1083 aa18.54■□□□□ 0.56
SNAPC4-201ENST00000298532 SETDB1Q15047 1291 aa18.53■□□□□ 0.56
SNAPC4-201ENST00000298532 MTHFSDQ2M296 383 aaKnown RBP18.53■□□□□ 0.56
SNAPC4-201ENST00000298532 STX8Q9UNK0 236 aa18.53■□□□□ 0.56
SNAPC4-201ENST00000298532 DZIP3Q86Y13 1208 aaKnown RBP18.53■□□□□ 0.56
SNAPC4-201ENST00000298532 CCT6AP40227 531 aaKnown RBP18.53■□□□□ 0.56
SNAPC4-201ENST00000298532 C8orf74Q6P047 294 aa18.53■□□□□ 0.56
SNAPC4-201ENST00000298532 ATP2A1O14983 1001 aa18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 TMTC1Q8IUR5 882 aa18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 HELLSQ9NRZ9 838 aa18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 SMC6Q96SB8 1091 aa18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 CYP7A1P22680 504 aa18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 BRD3Q15059 726 aa18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 FLAD1Q8NFF5 587 aa18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 CCNL1Q9UK58 526 aaPredicted RBP18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 NIP7Q9Y221 180 aaKnown RBP eCLIP18.52■□□□□ 0.56
SNAPC4-201ENST00000298532 RNMTO43148 476 aaKnown RBP18.52■□□□□ 0.55
SNAPC4-201ENST00000298532 CCDC174Q6PII3 467 aa18.52■□□□□ 0.55
SNAPC4-201ENST00000298532 CCDC50Q8IVM0 306 aa18.52■□□□□ 0.55
SNAPC4-201ENST00000298532 GOLGA6BA6NDN3 693 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 PPP1R2P41236 205 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 IFT74Q96LB3 600 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 ZRANB1Q9UGI0 708 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 HEATR3Q7Z4Q2 680 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 UBLCP1Q8WVY7 318 aaPredicted RBP18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 STIM2Q9P246 746 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 MAP3K9P80192 1104 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 ZNF215Q9UL58 517 aaPredicted RBP18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 SMIM23A6NLE4 172 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 DMTNQ08495 405 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 PPFIA1Q13136 1202 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 CDC37L1Q7L3B6 337 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 CCDC26Q8TAB7 109 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 EYA3Q99504 573 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 CLASP1Q7Z460 1538 aa18.51■□□□□ 0.55
SNAPC4-201ENST00000298532 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 ZNF202O95125 648 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 GNAT2P19087 354 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 ARHGAP31Q2M1Z3 1444 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 NFATC2IPQ8NCF5 419 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 HPDP32754 393 aaPredicted RBP18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 SWAP70Q9UH65 585 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms