RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 PRMT6Q96LA8 375 aaPredicted RBP33.42■■■□□ 2.94
CHCHD4-201ENST00000295767 ADARB2Q9NS39 739 aaKnown RBP33.42■■■□□ 2.94
CHCHD4-201ENST00000295767 IQCA1LA6NCM1 817 aa33.41■■■□□ 2.94
CHCHD4-201ENST00000295767 DYNLL1P63167 89 aaKnown RBP33.41■■■□□ 2.94
CHCHD4-201ENST00000295767 ZNF526Q8TF50 670 aaPredicted RBP33.41■■■□□ 2.94
CHCHD4-201ENST00000295767 FOCADQ5VW36 1801 aa33.4■■■□□ 2.94
CHCHD4-201ENST00000295767 M0R2C6 588 aa33.4■■■□□ 2.94
CHCHD4-201ENST00000295767 NOL10Q9BSC4 688 aaKnown RBP33.4■■■□□ 2.94
CHCHD4-201ENST00000295767 HELLSQ9NRZ9 838 aa33.4■■■□□ 2.94
CHCHD4-201ENST00000295767 MAGEB6P1A0A0J9YX57 407 aa33.39■■■□□ 2.94
CHCHD4-201ENST00000295767 WNT10BO00744 389 aa33.39■■■□□ 2.94
CHCHD4-201ENST00000295767 RIOK1Q9BRS2 568 aaKnown RBP33.39■■■□□ 2.94
CHCHD4-201ENST00000295767 MBD4O95243 580 aa33.39■■■□□ 2.93
CHCHD4-201ENST00000295767 EPHX2P34913 555 aa33.39■■■□□ 2.93
CHCHD4-201ENST00000295767 PPP4CP60510 307 aa33.39■■■□□ 2.93
CHCHD4-201ENST00000295767 NBPF9Q3BBW0 867 aa33.39■■■□□ 2.93
CHCHD4-201ENST00000295767 BAG3O95817 575 aa33.38■■■□□ 2.93
CHCHD4-201ENST00000295767 MCMDC2Q4G0Z9 681 aa33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 LCORLQ8N3X6 602 aa33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 AIDAQ96BJ3 306 aa33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 IL25Q9H293 177 aa33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 TAF1DQ9H5J8 278 aaPredicted RBP33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 TDRD3Q9H7E2 651 aaKnown RBP33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 ARMT1Q9H993 441 aa33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 RRAGCQ9HB90 399 aa33.37■■■□□ 2.93
CHCHD4-201ENST00000295767 HIRAP54198 1017 aaPredicted RBP33.36■■■□□ 2.93
CHCHD4-201ENST00000295767 RHBDL3P58872 404 aa33.36■■■□□ 2.93
CHCHD4-201ENST00000295767 CDC42EP5Q6NZY7 148 aa33.36■■■□□ 2.93
CHCHD4-201ENST00000295767 CCDC129Q6ZRS4 1044 aa33.36■■■□□ 2.93
CHCHD4-201ENST00000295767 NMRK2Q9NPI5 230 aa33.36■■■□□ 2.93
CHCHD4-201ENST00000295767 SH3RF3Q8TEJ3 882 aaPredicted RBP33.35■■■□□ 2.93
CHCHD4-201ENST00000295767 GPAA1O43292 621 aa33.35■■■□□ 2.93
CHCHD4-201ENST00000295767 ZNF589Q86UQ0 364 aaPredicted RBP33.35■■■□□ 2.93
CHCHD4-201ENST00000295767 USP40Q9NVE5 1235 aa33.35■■■□□ 2.93
CHCHD4-201ENST00000295767 POLR2AP24928 1970 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-201ENST00000295767 VEGFAP15692 232 aaPredicted RBP33.34■■■□□ 2.93
CHCHD4-201ENST00000295767 CASC1Q6TDU7 716 aa33.34■■■□□ 2.93
CHCHD4-201ENST00000295767 RUFY2Q8WXA3 655 aa33.34■■■□□ 2.93
CHCHD4-201ENST00000295767 ASTN2O75129 1339 aaPredicted RBP33.33■■■□□ 2.93
CHCHD4-201ENST00000295767 USP50Q70EL3 339 aaPredicted RBP33.33■■■□□ 2.93
CHCHD4-201ENST00000295767 RAD50Q92878 1312 aa33.33■■■□□ 2.93
CHCHD4-201ENST00000295767 CLRN2A0PK11 232 aa33.32■■■□□ 2.92
CHCHD4-201ENST00000295767 MYO1BO43795 1136 aa33.32■■■□□ 2.92
CHCHD4-201ENST00000295767 PLCG2P16885 1265 aa33.32■■■□□ 2.92
CHCHD4-201ENST00000295767 CERS3Q8IU89 383 aa33.32■■■□□ 2.92
CHCHD4-201ENST00000295767 STRBPQ96SI9 672 aaKnown RBP33.32■■■□□ 2.92
CHCHD4-201ENST00000295767 NAV1Q8NEY1 1877 aa33.32■■■□□ 2.92
CHCHD4-201ENST00000295767 SPDYE2Q495Y8 402 aa33.31■■■□□ 2.92
CHCHD4-201ENST00000295767 ESYT1Q9BSJ8 1104 aa33.31■■■□□ 2.92
CHCHD4-201ENST00000295767 ZNF70Q9UC06 446 aaPredicted RBP33.31■■■□□ 2.92
CHCHD4-201ENST00000295767 BAZ2AQ9UIF9 1905 aaKnown RBP33.31■■■□□ 2.92
CHCHD4-201ENST00000295767 CCDC171Q6TFL3 1326 aa33.31■■■□□ 2.92
CHCHD4-201ENST00000295767 SGSM2O43147 1006 aa33.31■■■□□ 2.92
CHCHD4-201ENST00000295767 CACNB3P54284 484 aa33.3■■■□□ 2.92
CHCHD4-201ENST00000295767 TEX11Q8IYF3 940 aa33.3■■■□□ 2.92
CHCHD4-201ENST00000295767 EAPPQ56P03 285 aaPredicted RBP33.29■■■□□ 2.92
CHCHD4-201ENST00000295767 CRNKL1Q9BZJ0 848 aaKnown RBP33.29■■■□□ 2.92
CHCHD4-201ENST00000295767 MYH1P12882 1939 aa33.29■■■□□ 2.92
CHCHD4-201ENST00000295767 PRKAB2O43741 272 aa33.28■■■□□ 2.92
CHCHD4-201ENST00000295767 WDHD1O75717 1129 aaPredicted RBP33.28■■■□□ 2.92
CHCHD4-201ENST00000295767 PNMA8AQ86V59 439 aaPredicted RBP33.28■■■□□ 2.92
CHCHD4-201ENST00000295767 DDX60LQ5H9U9 1706 aaKnown RBP33.28■■■□□ 2.92
CHCHD4-201ENST00000295767 GGA3Q9NZ52 723 aa33.28■■■□□ 2.92
CHCHD4-201ENST00000295767 TMOD2Q9NZR1 351 aa33.28■■■□□ 2.92
CHCHD4-201ENST00000295767 SLC4A4Q9Y6R1 1079 aa33.28■■■□□ 2.92
CHCHD4-201ENST00000295767 YY1P25490 414 aa33.27■■■□□ 2.92
CHCHD4-201ENST00000295767 MFAP1P55081 439 aaKnown RBP33.27■■■□□ 2.92
CHCHD4-201ENST00000295767 ANGEL2Q5VTE6 544 aaKnown RBP33.27■■■□□ 2.92
CHCHD4-201ENST00000295767 SDR42E1Q8WUS8 393 aa33.27■■■□□ 2.92
CHCHD4-201ENST00000295767 VEZTQ9HBM0 779 aa33.27■■■□□ 2.92
CHCHD4-201ENST00000295767 NFIAQ12857 509 aa33.26■■■□□ 2.91
CHCHD4-201ENST00000295767 VPS53Q5VIR6 699 aa33.26■■■□□ 2.91
CHCHD4-201ENST00000295767 TGFBRAP1Q8WUH2 860 aa33.26■■■□□ 2.91
CHCHD4-201ENST00000295767 GPBP1L1Q9HC44 474 aaPredicted RBP33.26■■■□□ 2.91
CHCHD4-201ENST00000295767 GNAT2P19087 354 aa33.25■■■□□ 2.91
CHCHD4-201ENST00000295767 C8orf34Q49A92 452 aa33.25■■■□□ 2.91
CHCHD4-201ENST00000295767 IDI2Q9BXS1 227 aa33.25■■■□□ 2.91
CHCHD4-201ENST00000295767 DDX4Q9NQI0 724 aaKnown RBP33.25■■■□□ 2.91
CHCHD4-201ENST00000295767 POTEIP0CG38 1075 aa33.24■■■□□ 2.91
CHCHD4-201ENST00000295767 POTEJP0CG39 1038 aa33.24■■■□□ 2.91
CHCHD4-201ENST00000295767 TCP10L2B9ZVM9 353 aa33.24■■■□□ 2.91
CHCHD4-201ENST00000295767 FOXP2O15409 715 aa33.24■■■□□ 2.91
CHCHD4-201ENST00000295767 USP5P45974 858 aa33.24■■■□□ 2.91
CHCHD4-201ENST00000295767 PICALMQ13492 652 aa33.24■■■□□ 2.91
CHCHD4-201ENST00000295767 FAM198AQ9UFP1 575 aa33.24■■■□□ 2.91
CHCHD4-201ENST00000295767 GSG1L2A8MUP6 293 aa33.23■■■□□ 2.91
CHCHD4-201ENST00000295767 MAPKAPK5Q8IW41 473 aa33.23■■■□□ 2.91
CHCHD4-201ENST00000295767 SCAF8Q9UPN6 1271 aaKnown RBP33.23■■■□□ 2.91
CHCHD4-201ENST00000295767 FLT1P17948 1338 aa33.23■■■□□ 2.91
CHCHD4-201ENST00000295767 ZC3H15Q8WU90 426 aaKnown RBP33.22■■■□□ 2.91
CHCHD4-201ENST00000295767 HSPD1P10809 573 aaKnown RBP33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 CNTNAP1P78357 1384 aa33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 FKBP1CQ5VVH2 108 aa33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 PITPNM2Q9BZ72 1349 aa33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 EPB41L4AQ9HCS5 686 aaPredicted RBP33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 DCP1AQ9NPI6 582 aaPredicted RBP33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 PGAP2Q9UHJ9 254 aa33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 LAMB1P07942 1786 aa33.21■■■□□ 2.91
CHCHD4-201ENST00000295767 PATL2C9JE40 543 aaKnown RBP33.2■■■□□ 2.91
CHCHD4-201ENST00000295767 TCP10Q12799 353 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms