RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 LNPKQ9C0E8 428 aa32.7■■■□□ 2.83
SSU72-201ENST00000291386 DEFB129Q9H1M3 183 aa32.7■■■□□ 2.83
SSU72-201ENST00000291386 CREBZFQ9NS37 354 aa32.7■■■□□ 2.83
SSU72-201ENST00000291386 STAP2Q9UGK3 403 aa32.7■■■□□ 2.83
SSU72-201ENST00000291386 SCAF8Q9UPN6 1271 aaKnown RBP32.7■■■□□ 2.83
SSU72-201ENST00000291386 IDH1O75874 414 aaKnown RBP32.69■■■□□ 2.82
SSU72-201ENST00000291386 NEFLP07196 543 aa32.69■■■□□ 2.82
SSU72-201ENST00000291386 PI4K2BQ8TCG2 481 aa32.69■■■□□ 2.82
SSU72-201ENST00000291386 TMOD2Q9NZR1 351 aa32.69■■■□□ 2.82
SSU72-201ENST00000291386 MAP4K4O95819 1239 aaPredicted RBP32.68■■■□□ 2.82
SSU72-201ENST00000291386 BTDP43251 543 aa32.68■■■□□ 2.82
SSU72-201ENST00000291386 GLRX3O76003 335 aaKnown RBP32.67■■■□□ 2.82
SSU72-201ENST00000291386 CELF2O95319 508 aaKnown RBP32.67■■■□□ 2.82
SSU72-201ENST00000291386 TNNI2P48788 182 aa32.67■■■□□ 2.82
SSU72-201ENST00000291386 TSHZ3Q63HK5 1081 aa32.67■■■□□ 2.82
SSU72-201ENST00000291386 FAM83AQ86UY5 434 aa32.67■■■□□ 2.82
SSU72-201ENST00000291386 EDC3Q96F86 508 aaKnown RBP32.67■■■□□ 2.82
SSU72-201ENST00000291386 USP40Q9NVE5 1235 aa32.67■■■□□ 2.82
SSU72-201ENST00000291386 RASA3Q14644 834 aa32.66■■■□□ 2.82
SSU72-201ENST00000291386 PDE1AP54750 535 aa32.65■■■□□ 2.82
SSU72-201ENST00000291386 PPP4CP60510 307 aa32.65■■■□□ 2.82
SSU72-201ENST00000291386 TCP10L2B9ZVM9 353 aa32.64■■■□□ 2.82
SSU72-201ENST00000291386 RHBDL3P58872 404 aa32.64■■■□□ 2.82
SSU72-201ENST00000291386 RFX7Q2KHR2 1363 aa32.64■■■□□ 2.82
SSU72-201ENST00000291386 ADGRA1Q86SQ6 560 aa32.64■■■□□ 2.82
SSU72-201ENST00000291386 MAGEB6Q8N7X4 407 aa32.64■■■□□ 2.82
SSU72-201ENST00000291386 IDI2Q9BXS1 227 aa32.64■■■□□ 2.82
SSU72-201ENST00000291386 MYH7P12883 1935 aa32.63■■■□□ 2.81
SSU72-201ENST00000291386 CNTNAP1P78357 1384 aa32.63■■■□□ 2.81
SSU72-201ENST00000291386 CACNB3P54284 484 aa32.63■■■□□ 2.81
SSU72-201ENST00000291386 BAG3O95817 575 aa32.62■■■□□ 2.81
SSU72-201ENST00000291386 CYP7A1P22680 504 aa32.62■■■□□ 2.81
SSU72-201ENST00000291386 PRAMEF18Q5VWM3 479 aa32.62■■■□□ 2.81
SSU72-201ENST00000291386 NOL10Q9BSC4 688 aaKnown RBP32.62■■■□□ 2.81
SSU72-201ENST00000291386 OSBPL3Q9H4L5 887 aa32.62■■■□□ 2.81
SSU72-201ENST00000291386 ZNF408Q9H9D4 720 aa32.62■■■□□ 2.81
SSU72-201ENST00000291386 RPAP1Q9BWH6 1393 aaPredicted RBP32.61■■■□□ 2.81
SSU72-201ENST00000291386 PDE6AP16499 860 aa32.61■■■□□ 2.81
SSU72-201ENST00000291386 SLC9C2Q5TAH2 1124 aa32.61■■■□□ 2.81
SSU72-201ENST00000291386 CERS3Q8IU89 383 aa32.61■■■□□ 2.81
SSU72-201ENST00000291386 TEPSINQ96N21 525 aa32.61■■■□□ 2.81
SSU72-201ENST00000291386 NPM3O75607 178 aaKnown RBP32.6■■■□□ 2.81
SSU72-201ENST00000291386 PLCG2P16885 1265 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 NF2P35240 595 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 FKBP1BP68106 108 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 NFIAQ12857 509 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 ERICH6BQ5W0A0 696 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 PLEKHM2Q8IWE5 1019 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 KBTBD3Q8NAB2 608 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 FAM151AQ8WW52 585 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.6■■■□□ 2.81
SSU72-201ENST00000291386 GBA2Q9HCG7 927 aaPredicted RBP32.6■■■□□ 2.81
SSU72-201ENST00000291386 TLL2Q9Y6L7 1015 aa32.6■■■□□ 2.81
SSU72-201ENST00000291386 TCRBV5S4A2TA0A5A2 114 aa32.59■■■□□ 2.81
SSU72-201ENST00000291386 WDHD1O75717 1129 aaPredicted RBP32.59■■■□□ 2.81
SSU72-201ENST00000291386 SUPT20HL1Q3ZLR7 823 aa32.59■■■□□ 2.81
SSU72-201ENST00000291386 AATFQ9NY61 560 aaKnown RBP eCLIP32.59■■■□□ 2.81
SSU72-201ENST00000291386 FAM198AQ9UFP1 575 aa32.59■■■□□ 2.81
SSU72-201ENST00000291386 PAPPA2Q9BXP8 1791 aa32.59■■■□□ 2.81
SSU72-201ENST00000291386 ENTPD3O75355 529 aa32.58■■■□□ 2.81
SSU72-201ENST00000291386 ADD2P35612 726 aa32.58■■■□□ 2.81
SSU72-201ENST00000291386 ZSCAN25Q6NSZ9 544 aa32.58■■■□□ 2.81
SSU72-201ENST00000291386 C2orf69Q8N8R5 385 aa32.58■■■□□ 2.81
SSU72-201ENST00000291386 TMEM39BQ9GZU3 492 aa32.58■■■□□ 2.81
SSU72-201ENST00000291386 HTRA3P83110 453 aa32.57■■■□□ 2.8
SSU72-201ENST00000291386 UBE3CQ15386 1083 aa32.57■■■□□ 2.8
SSU72-201ENST00000291386 SAPCD2Q86UD0 394 aa32.57■■■□□ 2.8
SSU72-201ENST00000291386 SSC5DA1L4H1 1573 aa32.57■■■□□ 2.8
SSU72-201ENST00000291386 ZNF532Q9HCE3 1301 aa32.56■■■□□ 2.8
SSU72-201ENST00000291386 NBPF12Q5TAG4 269 aaPredicted RBP32.56■■■□□ 2.8
SSU72-201ENST00000291386 CENPQQ7L2Z9 268 aaPredicted RBP32.56■■■□□ 2.8
SSU72-201ENST00000291386 HHIPL1Q96JK4 782 aa32.56■■■□□ 2.8
SSU72-201ENST00000291386 CDK5RAP2Q96SN8 1893 aa32.56■■■□□ 2.8
SSU72-201ENST00000291386 FOCADQ5VW36 1801 aa32.56■■■□□ 2.8
SSU72-201ENST00000291386 RGS3P49796 1198 aa32.55■■■□□ 2.8
SSU72-201ENST00000291386 SH3RF3Q8TEJ3 882 aaPredicted RBP32.55■■■□□ 2.8
SSU72-201ENST00000291386 ABT1Q9ULW3 272 aaKnown RBP32.55■■■□□ 2.8
SSU72-201ENST00000291386 RASSF10A6NK89 507 aa32.54■■■□□ 2.8
SSU72-201ENST00000291386 DDX4Q9NQI0 724 aaKnown RBP32.54■■■□□ 2.8
SSU72-201ENST00000291386 PDE4AP27815 886 aa32.53■■■□□ 2.8
SSU72-201ENST00000291386 TEX11Q8IYF3 940 aa32.53■■■□□ 2.8
SSU72-201ENST00000291386 RIOK1Q9BRS2 568 aaKnown RBP32.53■■■□□ 2.8
SSU72-201ENST00000291386 ZFYP08048 801 aaPredicted RBP32.52■■■□□ 2.8
SSU72-201ENST00000291386 DYNLL1P63167 89 aaKnown RBP32.52■■■□□ 2.8
SSU72-201ENST00000291386 TCP10Q12799 353 aa32.52■■■□□ 2.8
SSU72-201ENST00000291386 MAP3K11Q16584 847 aa32.52■■■□□ 2.8
SSU72-201ENST00000291386 CDAN1Q8IWY9 1227 aa32.52■■■□□ 2.8
SSU72-201ENST00000291386 MIGA1Q8NAN2 632 aa32.52■■■□□ 2.8
SSU72-201ENST00000291386 HOOK2Q96ED9 719 aa32.52■■■□□ 2.8
SSU72-201ENST00000291386 COL2A1P02458 1487 aaPredicted RBP32.52■■■□□ 2.8
SSU72-201ENST00000291386 LRRFIP1Q32MZ4 808 aaKnown RBP32.51■■■□□ 2.79
SSU72-201ENST00000291386 EVI5LQ96CN4 794 aa32.51■■■□□ 2.79
SSU72-201ENST00000291386 MAGEB6P1A0A0J9YX57 407 aa32.5■■■□□ 2.79
SSU72-201ENST00000291386 DEFB115Q30KQ5 88 aa32.5■■■□□ 2.79
SSU72-201ENST00000291386 TICAM2Q86XR7 235 aa32.5■■■□□ 2.79
SSU72-201ENST00000291386 ZFPM1Q8IX07 1006 aa32.5■■■□□ 2.79
SSU72-201ENST00000291386 DNAJC5GQ8N7S2 189 aa32.5■■■□□ 2.79
SSU72-201ENST00000291386 CCDC136Q96JN2 1154 aa32.5■■■□□ 2.79
SSU72-201ENST00000291386 ATRNL1Q5VV63 1379 aa32.49■■■□□ 2.79
SSU72-201ENST00000291386 PPP1R12BO60237 982 aaPredicted RBP32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms