RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 VPS16Q9H269 839 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 SAMM50Q9Y512 469 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 ZNF335Q9H4Z2 1342 aaPredicted RBP5.47□□□□□ -1.53
UBR1-201ENST00000290650 ZNF202O95125 648 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 BAG3O95817 575 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 IGKV5-2P06315 115 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 CALM1P0DP23 149 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 CALM2P0DP24 149 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 CALM3P0DP25 149 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 ATP5JP18859 108 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 ZNF445P59923 1031 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 GTF3C6Q969F1 213 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 TBC1D7Q9P0N9 293 aa5.47□□□□□ -1.53
UBR1-201ENST00000290650 CCNL1Q9UK58 526 aaPredicted RBP5.47□□□□□ -1.53
UBR1-201ENST00000290650 ANGEL1Q9UNK9 670 aaKnown RBP5.47□□□□□ -1.53
UBR1-201ENST00000290650 SH3TC1Q8TE82 1336 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 CYP27B1O15528 508 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 KIF5CO60282 957 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 TNNI2P48788 182 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 SP4Q02446 784 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 TCIRG1Q13488 830 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 TGFBRAP1Q8WUH2 860 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 VEZTQ9HBM0 779 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 ZSWIM6Q9HCJ5 1215 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 A0A0G2JLW4 131 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 KRT2P35908 639 aa5.46□□□□□ -1.53
UBR1-201ENST00000290650 SF3B2Q13435 895 aaKnown RBP5.46□□□□□ -1.53
UBR1-201ENST00000290650 FNBP4Q8N3X1 1017 aaPredicted RBP5.46□□□□□ -1.53
UBR1-201ENST00000290650 UFL1O94874 794 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 LDHBP07195 334 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 ST5P78524 1137 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 ANO1Q5XXA6 986 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 GRAMD1CQ8IYS0 662 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 BMP2KQ9NSY1 1161 aaPredicted RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 PTPRMP28827 1452 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 RIOK3O14730 519 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 DYNLL1P63167 89 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 SYCP1Q15431 976 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 HAUS7Q99871 368 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 JADE2Q9NQC1 790 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 TCP11L1Q9NUJ3 509 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 ERBB3P21860 1342 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 PTCH1Q13635 1447 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 NEXMIFQ5QGS0 1516 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 TRIM75PA6NK02 468 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 CCP110O43303 1012 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 MYCNP04198 464 aaPredicted RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 TRIM21P19474 475 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 KIF5BP33176 963 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 NDUFA8P51970 172 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 RNASE9P60153 205 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 ASIC1P78348 528 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 PTPN12Q05209 780 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 MTERF4Q7Z6M4 381 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 HOMEZQ8IX15 550 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 BCCIPQ9P287 314 aaKnown RBP eCLIP5.46□□□□□ -1.54
UBR1-201ENST00000290650 UVSSAQ2YD98 709 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 JAKMIP3Q5VZ66 844 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 TMCO3Q6UWJ1 677 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 MAEAQ7L5Y9 396 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 DIS3L2Q8IYB7 885 aaKnown RBP5.46□□□□□ -1.54
UBR1-201ENST00000290650 GPKOWQ92917 476 aaPredicted RBP eCLIP5.46□□□□□ -1.54
UBR1-201ENST00000290650 OSBP2Q969R2 916 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 FEZ1Q99689 392 aa5.46□□□□□ -1.54
UBR1-201ENST00000290650 ADCY9O60503 1353 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 U2AF2P26368 475 aaKnown RBP eCLIP5.45□□□□□ -1.543e-7■■■■□ 20.6
UBR1-201ENST00000290650 MCM6Q14566 821 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 PTPROQ16827 1216 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 KRT40Q6A162 431 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 TPTE2Q6XPS3 522 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 PSMB7Q99436 277 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 TAF6LQ9Y6J9 622 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 FRMPD2Q68DX3 1309 aaPredicted RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 PPLO60437 1756 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 CCNT1O60563 726 aaKnown RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 PRPF4BQ13523 1007 aaKnown RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 CNNM2Q9H8M5 875 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 KIF20BQ96Q89 1820 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 RHOXF2BP0C7M4 288 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 ADKP55263 362 aaKnown RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 TAX1BP1Q86VP1 789 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 SMYD4Q8IYR2 804 aaPredicted RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 PIGBQ92521 554 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 RHOXF2Q9BQY4 288 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 EXOC1Q9NV70 894 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 CCDC87Q9NVE4 849 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 INO80Q9ULG1 1556 aaPredicted RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 ITSN1Q15811 1721 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 USP17L12C9JPN9 530 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 USP17L21D6R901 530 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 SORBS3O60504 671 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 PHACTR2O75167 634 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 CDC25AP30304 524 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 GTF2F1P35269 517 aaKnown RBP eCLIP5.45□□□□□ -1.54
UBR1-201ENST00000290650 SCNN1DP51172 638 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 UBXN1Q04323 297 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 GUCA1BQ9UMX6 200 aa5.45□□□□□ -1.54
UBR1-201ENST00000290650 RIMS1Q86UR5 1692 aaKnown RBP5.45□□□□□ -1.54
UBR1-201ENST00000290650 DIP2CQ9Y2E4 1556 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms