RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FOXD4L3Q6VB84 417 aaPredicted RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 USP48Q86UV5 1035 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 TMEM87BQ96K49 555 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 CRAMP1Q96RY5 1269 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 CNNM2Q9H8M5 875 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 NCOA5Q9HCD5 579 aaKnown RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 ANKIB1Q9P2G1 1089 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 ANGEL1Q9UNK9 670 aaKnown RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 TACC3Q9Y6A5 838 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 GOLGA8BA8MQT2 603 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 B4E1Z4 1266 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 CCT2P78371 535 aaKnown RBP11.97□□□□□ -0.49
C9orf43-201ENST00000288462 GPSM2P81274 684 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 MECOMQ03112 1051 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
C9orf43-201ENST00000288462 BRIP1Q9BX63 1249 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 ANAPC4Q9UJX5 808 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 KIF3AQ9Y496 699 aa11.97□□□□□ -0.49
C9orf43-201ENST00000288462 BBOX1O75936 387 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 DNM1Q05193 864 aaKnown RBP11.96□□□□□ -0.49
C9orf43-201ENST00000288462 CTDSPL2Q05D32 466 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 RESTQ13127 1097 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 ZSCAN23Q3MJ62 389 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 ZNF804AQ7Z570 1209 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 NLGN1Q8N2Q7 840 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 FLAD1Q8NFF5 587 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 DDX11Q96FC9 970 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 KRT23Q9C075 422 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 NID2Q14112 1375 aa11.96□□□□□ -0.49
C9orf43-201ENST00000288462 NAV1Q8NEY1 1877 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 CDK5RAP2Q96SN8 1893 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 GADD45BO75293 160 aaPredicted RBP11.96□□□□□ -0.5
C9orf43-201ENST00000288462 ATP2B4P23634 1241 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 CHAF1AQ13111 956 aaPredicted RBP11.96□□□□□ -0.5
C9orf43-201ENST00000288462 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 TMC4Q7Z404 712 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 FAM184AQ8NB25 1140 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 TMEM63CQ9P1W3 806 aa11.96□□□□□ -0.5
C9orf43-201ENST00000288462 DHX16O60231 1041 aaKnown RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 NCLP19338 710 aaKnown RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 PRDX5P30044 214 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 DYNLL1P63167 89 aaKnown RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 PPARAQ07869 468 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 SPTY2D1Q68D10 685 aaPredicted RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 MFSD6Q6ZSS7 791 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 FERMT3Q86UX7 667 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 GAS2L3Q86XJ1 694 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 WDR66Q8TBY9 1149 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 IGDCC4Q8TDY8 1250 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 MTA3Q9BTC8 594 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 RNF41Q9H4P4 317 aaPredicted RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 LY9Q9HBG7 655 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 RBM27Q9P2N5 1060 aaKnown RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 NAP1L2Q9ULW6 460 aaPredicted RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 DDX60LQ5H9U9 1706 aaKnown RBP11.95□□□□□ -0.5
C9orf43-201ENST00000288462 FIBPO43427 364 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 LIFRP42702 1097 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 MRE11P49959 708 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 UBE2HP62256 183 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 KRT85P78386 507 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 MYH2Q9UKX2 1941 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 ELP1O95163 1332 aa11.95□□□□□ -0.5
C9orf43-201ENST00000288462 KDM4AO75164 1064 aa11.94□□□□□ -0.5
C9orf43-201ENST00000288462 UFL1O94874 794 aa11.94□□□□□ -0.5
C9orf43-201ENST00000288462 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
C9orf43-201ENST00000288462 APOA5Q6Q788 366 aa11.94□□□□□ -0.5
C9orf43-201ENST00000288462 INCENPQ9NQS7 918 aa11.94□□□□□ -0.5
C9orf43-201ENST00000288462 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
C9orf43-201ENST00000288462 GGA1Q9UJY5 639 aa11.94□□□□□ -0.5
C9orf43-201ENST00000288462 H3BQV1 296 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 IL1R1P14778 569 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 TMEM67Q5HYA8 995 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 GRPEL1Q9HAV7 217 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 SENP2Q9HC62 589 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 PPEF1O14829 653 aaPredicted RBP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 FGRP09769 529 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 PCP11498 1178 aaKnown RBP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 XRCC6P12956 609 aaKnown RBP eCLIP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 DZIP1Q86YF9 867 aaKnown RBP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 RGS22Q8NE09 1264 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
C9orf43-201ENST00000288462 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
C9orf43-201ENST00000288462 FAM173BQ6P4H8 233 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 TTC6Q86TZ1 520 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 SP8Q8IXZ3 490 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
C9orf43-201ENST00000288462 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 IFIT3O14879 490 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms