RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 MED23Q9ULK4 1368 aa10.84□□□□□ -0.67
CSF1R-201ENST00000286301 BCL9O00512 1426 aa10.84□□□□□ -0.67
CSF1R-201ENST00000286301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.84□□□□□ -0.67
CSF1R-201ENST00000286301 U2AF2P26368 475 aaKnown RBP eCLIP10.84□□□□□ -0.67
CSF1R-201ENST00000286301 TNNT3P45378 269 aaPredicted RBP10.84□□□□□ -0.67
CSF1R-201ENST00000286301 RBM5P52756 815 aaKnown RBP eCLIP10.84□□□□□ -0.67
CSF1R-201ENST00000286301 ZNF622Q969S3 477 aaKnown RBP eCLIP10.84□□□□□ -0.67
CSF1R-201ENST00000286301 RNF41Q9H4P4 317 aaPredicted RBP10.84□□□□□ -0.67
CSF1R-201ENST00000286301 STX8Q9UNK0 236 aa10.84□□□□□ -0.67
CSF1R-201ENST00000286301 CDHR2Q9BYE9 1310 aa10.84□□□□□ -0.67
CSF1R-201ENST00000286301 ZSCAN20P17040 1043 aaPredicted RBP10.84□□□□□ -0.67
CSF1R-201ENST00000286301 AIFM3Q96NN9 605 aa10.84□□□□□ -0.67
CSF1R-201ENST00000286301 A0A1B0GVL5 298 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 PDILTQ8N807 584 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.83□□□□□ -0.68
CSF1R-201ENST00000286301 XBP1P17861 261 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 ZNF445P59923 1031 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 RTN1Q16799 776 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 NSUN7Q8NE18 718 aaKnown RBP10.83□□□□□ -0.68
CSF1R-201ENST00000286301 ARHGEF1Q92888 912 aaKnown RBP10.83□□□□□ -0.68
CSF1R-201ENST00000286301 VIRMAQ69YN4 1812 aaKnown RBP10.83□□□□□ -0.68
CSF1R-201ENST00000286301 AFF2P51816 1311 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 PATL2C9JE40 543 aaKnown RBP10.83□□□□□ -0.68
CSF1R-201ENST00000286301 PFKFB2O60825 505 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 ADCY5O95622 1261 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 ST5P78524 1137 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 HS1BP3Q53T59 392 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 MSL1Q68DK7 614 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 ESR2Q92731 530 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 KRT23Q9C075 422 aa10.83□□□□□ -0.68
CSF1R-201ENST00000286301 A0A087WWV3 80 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 UFL1O94874 794 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 UBE3CQ15386 1083 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
CSF1R-201ENST00000286301 USP28Q96RU2 1077 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 USP17L12C9JPN9 530 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 USP17L21D6R901 530 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 TERF1P54274 439 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 ANO6Q4KMQ2 910 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 TBC1D10CQ8IV04 446 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 CRNKL1Q9BZJ0 848 aaKnown RBP10.82□□□□□ -0.68
CSF1R-201ENST00000286301 SAP30BPQ9UHR5 308 aaKnown RBP10.82□□□□□ -0.68
CSF1R-201ENST00000286301 NOLC1Q14978 699 aaKnown RBP eCLIP10.82□□□□□ -0.68
CSF1R-201ENST00000286301 FAM47AQ5JRC9 791 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 CATIPQ7Z7H3 387 aa10.82□□□□□ -0.68
CSF1R-201ENST00000286301 RPAP1Q9BWH6 1393 aaPredicted RBP10.81□□□□□ -0.68
CSF1R-201ENST00000286301 ZNF165P49910 485 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 PICALMQ13492 652 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 C3orf67Q6ZVT6 689 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 LUZP1Q86V48 1076 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 MINPP1Q9UNW1 487 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 NR1I2O75469 434 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 HSPA1LP34931 641 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 FILIP1Q7Z7B0 1213 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 ZSCAN29Q8IWY8 852 aaPredicted RBP10.81□□□□□ -0.68
CSF1R-201ENST00000286301 CTCFLQ8NI51 663 aaPredicted RBP10.81□□□□□ -0.68
CSF1R-201ENST00000286301 STRBPQ96SI9 672 aaKnown RBP10.81□□□□□ -0.68
CSF1R-201ENST00000286301 CNNM2Q9H8M5 875 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 VAT1LQ9HCJ6 419 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 DDX19AQ9NUU7 478 aaKnown RBP10.81□□□□□ -0.68
CSF1R-201ENST00000286301 KCNJ14Q9UNX9 436 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 NTSR2O95665 410 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 LDHBP07195 334 aaKnown RBP10.81□□□□□ -0.68
CSF1R-201ENST00000286301 SPECC1Q5M775 1068 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 ZSWIM5Q9P217 1185 aa10.81□□□□□ -0.68
CSF1R-201ENST00000286301 ZNF500O60304 480 aaPredicted RBP10.8□□□□□ -0.68
CSF1R-201ENST00000286301 TPM4P67936 248 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 ZNF444Q8N0Y2 327 aaPredicted RBP10.8□□□□□ -0.68
CSF1R-201ENST00000286301 BRMS1Q9HCU9 246 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 CCDC196A0A1B0GTZ2 297 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 RPS6KA4O75676 772 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 GNAT2P19087 354 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 TYRO3Q06418 890 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 ZNF274Q96GC6 653 aaPredicted RBP10.8□□□□□ -0.68
CSF1R-201ENST00000286301 ZFP91Q96JP5 570 aaPredicted RBP10.8□□□□□ -0.68
CSF1R-201ENST00000286301 GJD4Q96KN9 370 aaPredicted RBP10.8□□□□□ -0.68
CSF1R-201ENST00000286301 ANKRD2Q9GZV1 360 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 PES1O00541 588 aaKnown RBP10.8□□□□□ -0.68
CSF1R-201ENST00000286301 SMC2O95347 1197 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 PRDX5P30044 214 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 ST3GAL1Q11201 340 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 HSP90AA4PQ58FG1 418 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 CYB5R4Q7L1T6 521 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 LLPHQ9BRT6 129 aaKnown RBP10.8□□□□□ -0.68
CSF1R-201ENST00000286301 TRIM34Q9BYJ4 488 aa10.8□□□□□ -0.68
CSF1R-201ENST00000286301 PPARAQ07869 468 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 TRPC5Q9UL62 973 aaPredicted RBP10.79□□□□□ -0.68
CSF1R-201ENST00000286301 ZNF804BA4D1E1 1349 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 SPTLC2O15270 562 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 MARCH6O60337 910 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 KLRK1P26718 216 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 VPS72Q15906 364 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 CLEC4GQ6UXB4 293 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 HOMER1Q86YM7 354 aa10.79□□□□□ -0.68
CSF1R-201ENST00000286301 NARFQ9UHQ1 456 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms