RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CEBPZQ03701 1054 aaKnown RBP11.98□□□□□ -0.49
SKA1-201ENST00000285116 NCAPHQ15003 741 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 STK38Q15208 465 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 TMCO3Q6UWJ1 677 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 TXLNBQ8N3L3 684 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 NCOA7Q8NI08 942 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 PPP1R13BQ96KQ4 1090 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
SKA1-201ENST00000285116 ZRANB2O95218 330 aaKnown RBP eCLIP11.97□□□□□ -0.49
SKA1-201ENST00000285116 HSPA1LP34931 641 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 KIF23Q02241 960 aaPredicted RBP11.97□□□□□ -0.49
SKA1-201ENST00000285116 SLC39A14Q15043 492 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 ARHGAP29Q52LW3 1261 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 CCDC158Q5M9N0 1113 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 E4F1Q66K89 784 aaPredicted RBP11.97□□□□□ -0.49
SKA1-201ENST00000285116 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 CLIC4Q9Y696 253 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 A0A0G2JLW4 131 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 ATP8B1O43520 1251 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 PRC1O43663 620 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 NRDCO43847 1150 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 ANTXR2P58335 489 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 LRRC24Q50LG9 513 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 FCHSD1Q86WN1 690 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 SDF4Q9BRK5 362 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 FEZ2Q9UHY8 353 aaPredicted RBP11.97□□□□□ -0.49
SKA1-201ENST00000285116 CSF1RP07333 972 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 SLC3A2P08195 630 aaKnown RBP11.97□□□□□ -0.49
SKA1-201ENST00000285116 DPCR1Q3MIW9 517 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 MUM1L1Q5H9M0 696 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 SYT10Q6XYQ8 523 aa11.97□□□□□ -0.49
SKA1-201ENST00000285116 ORC3Q9UBD5 711 aaPredicted RBP11.97□□□□□ -0.49
SKA1-201ENST00000285116 CDKL5O76039 1030 aa11.96□□□□□ -0.49
SKA1-201ENST00000285116 ZNF202O95125 648 aa11.96□□□□□ -0.49
SKA1-201ENST00000285116 FGAP02671 866 aa11.96□□□□□ -0.49
SKA1-201ENST00000285116 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
SKA1-201ENST00000285116 TTLL7Q6ZT98 887 aa11.96□□□□□ -0.49
SKA1-201ENST00000285116 UBXN4Q92575 508 aa11.96□□□□□ -0.49
SKA1-201ENST00000285116 NGLY1Q96IV0 654 aa11.96□□□□□ -0.49
SKA1-201ENST00000285116 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.96□□□□□ -0.49
SKA1-201ENST00000285116 CDHR2Q9BYE9 1310 aa11.96□□□□□ -0.5
SKA1-201ENST00000285116 STK36Q9NRP7 1315 aa11.96□□□□□ -0.5
SKA1-201ENST00000285116 A0A1B0GVL5 298 aa11.96□□□□□ -0.5
SKA1-201ENST00000285116 ARMCX5Q6P1M9 558 aa11.96□□□□□ -0.5
SKA1-201ENST00000285116 SRRTQ9BXP5 876 aaKnown RBP11.96□□□□□ -0.5
SKA1-201ENST00000285116 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.5
SKA1-201ENST00000285116 TMX1Q9H3N1 280 aa11.96□□□□□ -0.5
SKA1-201ENST00000285116 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.5
SKA1-201ENST00000285116 SPATA31A3Q5VYP0 1347 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 PHLPP2Q6ZVD8 1323 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 KLF18A0A0U1RQI7 1052 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 GOLGA8BA8MQT2 603 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
SKA1-201ENST00000285116 TPM1P09493 284 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 TTLL5Q6EMB2 1281 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 PTF1AQ7RTS3 328 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 JMYQ8N9B5 988 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 XAGE2Q96GT9 111 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 XPO4Q9C0E2 1151 aaKnown RBP11.95□□□□□ -0.5
SKA1-201ENST00000285116 CBFA2T2O43439 604 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 PFKFB1P16118 471 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 SF3A1Q15459 793 aaKnown RBP11.95□□□□□ -0.5
SKA1-201ENST00000285116 ZRSR1Q15695 479 aaKnown RBP11.95□□□□□ -0.5
SKA1-201ENST00000285116 TTC39AQ5SRH9 613 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 LRRN4CLQ8ND94 238 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 HSD3B7Q9H2F3 369 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
SKA1-201ENST00000285116 SFPQP23246 707 aaKnown RBP eCLIP11.94□□□□□ -0.5
SKA1-201ENST00000285116 GPS2Q13227 327 aa11.94□□□□□ -0.5
SKA1-201ENST00000285116 ALX1Q15699 326 aa11.94□□□□□ -0.5
SKA1-201ENST00000285116 SYNE3Q6ZMZ3 975 aa11.94□□□□□ -0.5
SKA1-201ENST00000285116 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.94□□□□□ -0.5
SKA1-201ENST00000285116 ETF1P62495 437 aaKnown RBP11.94□□□□□ -0.5
SKA1-201ENST00000285116 PTPAQ15257 358 aa11.94□□□□□ -0.5
SKA1-201ENST00000285116 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
SKA1-201ENST00000285116 MYO5AQ9Y4I1 1855 aaKnown RBP11.94□□□□□ -0.5
SKA1-201ENST00000285116 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 GUCY1B3Q02153 619 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 TTF1Q15361 905 aaPredicted RBP11.93□□□□□ -0.5
SKA1-201ENST00000285116 UBE3CQ15386 1083 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 CCDC57Q2TAC2 916 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 RESP18Q5W5W9 173 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 TMEM87BQ96K49 555 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 TRERF1Q96PN7 1200 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 MAP3K14Q99558 947 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 UBXN6Q9BZV1 441 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 IFNKQ9P0W0 207 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 ANGEL1Q9UNK9 670 aaKnown RBP11.93□□□□□ -0.5
SKA1-201ENST00000285116 MROH7-TTC4A0A0A0MT08 1334 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
SKA1-201ENST00000285116 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 XIRP1Q702N8 1843 aaKnown RBP11.93□□□□□ -0.5
SKA1-201ENST00000285116 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
SKA1-201ENST00000285116 ZNF213O14771 459 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
SKA1-201ENST00000285116 RALYLQ86SE5 291 aaKnown RBP11.93□□□□□ -0.5
SKA1-201ENST00000285116 SGMS1Q86VZ5 419 aa11.93□□□□□ -0.5
SKA1-201ENST00000285116 MNS1Q8NEH6 495 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms