RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 TPM2P07951 284 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 GTF3C2Q8WUA4 911 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-201ENST00000281821 DBNLQ9UJU6 430 aaKnown RBP9.05□□□□□ -0.96
EPHA4-201ENST00000281821 GYG1P46976 350 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 KCNQ4P56696 695 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 SSRP1Q08945 709 aaKnown RBP9.05□□□□□ -0.96
EPHA4-201ENST00000281821 AKT1S1Q96B36 256 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 RNF181Q9P0P0 153 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 VPS37CA5D8V6 355 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-201ENST00000281821 CCNA1P78396 465 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 SHPRHQ149N8 1683 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 TBC1D16Q8TBP0 767 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 ALS2Q96Q42 1657 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 LRRC27Q9C0I9 530 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 ZNF532Q9HCE3 1301 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 RIC1Q4ADV7 1423 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 ARID4AP29374 1257 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 TM4SF1P30408 202 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 FOXO4P98177 505 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 BAG4O95429 457 aaKnown RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 ZMYM1Q5SVZ6 1142 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 NAP1L5Q96NT1 182 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 PI4KBQ9UBF8 816 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 HERC5Q9UII4 1024 aaKnown RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 NWD2Q9ULI1 1742 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 CCDC194A0A1B0GVG4 234 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 DPEP1P16444 411 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 RCAN1P53805 252 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 RCSD1Q6JBY9 416 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 MRIQ9BWK5 157 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 PICALMQ13492 652 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 BRDTQ58F21 947 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 BTDP43251 543 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 METAP2P50579 478 aaKnown RBP eCLIP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 KRT85P78386 507 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 TMEM266Q2M3C6 531 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 NOL8Q76FK4 1167 aaKnown RBP9.04□□□□□ -0.96
EPHA4-201ENST00000281821 CDK5RAP3Q96JB5 506 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 KANSL2Q9H9L4 492 aa9.04□□□□□ -0.96
EPHA4-201ENST00000281821 ECE2O60344 883 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 KIF20AO95235 890 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 PHKA1P46020 1223 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 ALX1Q15699 326 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 L1TD1Q5T7N2 865 aaKnown RBP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 ZNF76P36508 570 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 BCAMP50895 628 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 RTN1Q16799 776 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 AKNAD1Q5T1N1 836 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 C6orf50Q9HD87 102 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 SERPINA10Q9UK55 444 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 GPATCH4Q5T3I0 446 aaKnown RBP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 ATL3Q6DD88 541 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 DPF2Q92785 391 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 LLPHQ9BRT6 129 aaKnown RBP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 LETM1O95202 739 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 KIF22Q14807 665 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 KLHDC4Q8TBB5 520 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 UPF1Q92900 1129 aaKnown RBP eCLIP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 SCAND2PQ9GZW5 306 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-201ENST00000281821 FAM13BQ9NYF5 915 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 TPM3P06753 285 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 ASNSP08243 561 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 FKBP1CQ5VVH2 108 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 KIAA0825Q8IV33 1275 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 HACL1Q9UJ83 578 aa9.03□□□□□ -0.96
EPHA4-201ENST00000281821 PHRF1Q9P1Y6 1649 aaKnown RBP9.02□□□□□ -0.96
EPHA4-201ENST00000281821 DKC1O60832 514 aaKnown RBP eCLIP9.02□□□□□ -0.96
EPHA4-201ENST00000281821 ZBED4O75132 1171 aa9.02□□□□□ -0.96
EPHA4-201ENST00000281821 STK38Q15208 465 aa9.02□□□□□ -0.96
EPHA4-201ENST00000281821 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.96
EPHA4-201ENST00000281821 WWC2Q6AWC2 1192 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 TTC14Q96N46 770 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 SERPINB13Q9UIV8 391 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 PRC1O43663 620 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 ZSCAN16Q9H4T2 348 aaPredicted RBP9.02□□□□□ -0.97
EPHA4-201ENST00000281821 IVNS1ABPQ9Y6Y0 642 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 PNPLA7Q6ZV29 1317 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 ADD2P35612 726 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 FBXO33Q7Z6M2 555 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 INTS4Q96HW7 963 aaKnown RBP9.02□□□□□ -0.97
EPHA4-201ENST00000281821 C8orf76Q96K31 380 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 PUS3Q9BZE2 481 aaKnown RBP9.02□□□□□ -0.97
EPHA4-201ENST00000281821 TNNQ9UQP3 1299 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 ERMNQ8TAM6 284 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 ZNF341Q9BYN7 854 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 RABGAP1Q9Y3P9 1069 aa9.02□□□□□ -0.97
EPHA4-201ENST00000281821 PARP1P09874 1014 aaKnown RBP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 CRY2Q49AN0 593 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 GALNT17Q6IS24 598 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 TDRD7Q8NHU6 1098 aaKnown RBP9.01□□□□□ -0.97
EPHA4-201ENST00000281821 KCNG1Q9UIX4 513 aa9.01□□□□□ -0.97
EPHA4-201ENST00000281821 ANGEL1Q9UNK9 670 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms