RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 MBD4O95243 580 aa20.69■□□□□ 0.9
SKP2-201ENST00000274254 BAG3O95817 575 aa20.69■□□□□ 0.9
SKP2-201ENST00000274254 EGFRP00533 1210 aa20.69■□□□□ 0.9
SKP2-201ENST00000274254 LMOD1P29536 600 aaPredicted RBP20.69■□□□□ 0.9
SKP2-201ENST00000274254 RBM5P52756 815 aaKnown RBP eCLIP20.69■□□□□ 0.9
SKP2-201ENST00000274254 DLGAP5Q15398 846 aa20.69■□□□□ 0.9
SKP2-201ENST00000274254 ZNF589Q86UQ0 364 aaPredicted RBP20.69■□□□□ 0.9
SKP2-201ENST00000274254 CERS3Q8IU89 383 aa20.69■□□□□ 0.9
SKP2-201ENST00000274254 AIDAQ96BJ3 306 aa20.69■□□□□ 0.9
SKP2-201ENST00000274254 PRMT6Q96LA8 375 aaPredicted RBP20.69■□□□□ 0.9
SKP2-201ENST00000274254 RHBDL3P58872 404 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 DYNLL1P63167 89 aaKnown RBP20.68■□□□□ 0.9
SKP2-201ENST00000274254 CCDC129Q6ZRS4 1044 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 SAMD7Q7Z3H4 446 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 LCORLQ8N3X6 602 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 STRBPQ96SI9 672 aaKnown RBP20.68■□□□□ 0.9
SKP2-201ENST00000274254 SCN4AP35499 1836 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 CCDC171Q6TFL3 1326 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 POTECB2RU33 542 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 WNT10BO00744 389 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 PLCG2P16885 1265 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 NOL10Q9BSC4 688 aaKnown RBP20.68■□□□□ 0.9
SKP2-201ENST00000274254 ARMT1Q9H993 441 aa20.68■□□□□ 0.9
SKP2-201ENST00000274254 KIF4BQ2VIQ3 1234 aa20.67■□□□□ 0.9
SKP2-201ENST00000274254 TBC1D10BQ4KMP7 808 aaPredicted RBP20.67■□□□□ 0.9
SKP2-201ENST00000274254 CDC42EP5Q6NZY7 148 aa20.67■□□□□ 0.9
SKP2-201ENST00000274254 TRPM4Q8TD43 1214 aa20.67■□□□□ 0.9
SKP2-201ENST00000274254 ADARB2Q9NS39 739 aaKnown RBP20.67■□□□□ 0.9
SKP2-201ENST00000274254 HACL1Q9UJ83 578 aa20.67■□□□□ 0.9
SKP2-201ENST00000274254 IQCA1LA6NCM1 817 aa20.66■□□□□ 0.9
SKP2-201ENST00000274254 MFAP1P55081 439 aaKnown RBP20.66■□□□□ 0.9
SKP2-201ENST00000274254 SH3RF3Q8TEJ3 882 aaPredicted RBP20.66■□□□□ 0.9
SKP2-201ENST00000274254 NBPF9Q3BBW0 867 aa20.65■□□□□ 0.9
SKP2-201ENST00000274254 RBM26Q5T8P6 1007 aaKnown RBP20.65■□□□□ 0.9
SKP2-201ENST00000274254 USP40Q9NVE5 1235 aa20.65■□□□□ 0.9
SKP2-201ENST00000274254 FOXP2O15409 715 aa20.64■□□□□ 0.9
SKP2-201ENST00000274254 GNAT2P19087 354 aa20.64■□□□□ 0.9
SKP2-201ENST00000274254 HIRAP54198 1017 aaPredicted RBP20.64■□□□□ 0.9
SKP2-201ENST00000274254 TDRD3Q9H7E2 651 aaKnown RBP20.64■□□□□ 0.9
SKP2-201ENST00000274254 ECM29Q5VYK3 1845 aa20.64■□□□□ 0.9
SKP2-201ENST00000274254 CDK5RAP2Q96SN8 1893 aa20.64■□□□□ 0.89
SKP2-201ENST00000274254 WDHD1O75717 1129 aaPredicted RBP20.63■□□□□ 0.89
SKP2-201ENST00000274254 EPHX2P34913 555 aa20.63■□□□□ 0.89
SKP2-201ENST00000274254 SPDYE2Q495Y8 402 aa20.63■□□□□ 0.89
SKP2-201ENST00000274254 CRNKL1Q9BZJ0 848 aaKnown RBP20.63■□□□□ 0.89
SKP2-201ENST00000274254 TAF1DQ9H5J8 278 aaPredicted RBP20.63■□□□□ 0.89
SKP2-201ENST00000274254 PRKAB2O43741 272 aa20.63■□□□□ 0.89
SKP2-201ENST00000274254 MYO1BO43795 1136 aa20.63■□□□□ 0.89
SKP2-201ENST00000274254 VPS53Q5VIR6 699 aa20.63■□□□□ 0.89
SKP2-201ENST00000274254 TEX11Q8IYF3 940 aa20.63■□□□□ 0.89
SKP2-201ENST00000274254 ZNF70Q9UC06 446 aaPredicted RBP20.63■□□□□ 0.89
SKP2-201ENST00000274254 SLC4A4Q9Y6R1 1079 aa20.63■□□□□ 0.89
SKP2-201ENST00000274254 RPAP1Q9BWH6 1393 aaPredicted RBP20.62■□□□□ 0.89
SKP2-201ENST00000274254 FOCADQ5VW36 1801 aa20.62■□□□□ 0.89
SKP2-201ENST00000274254 GSG1L2A8MUP6 293 aa20.62■□□□□ 0.89
SKP2-201ENST00000274254 HSPD1P10809 573 aaKnown RBP20.62■□□□□ 0.89
SKP2-201ENST00000274254 USP50Q70EL3 339 aaPredicted RBP20.62■□□□□ 0.89
SKP2-201ENST00000274254 SDR42E1Q8WUS8 393 aa20.62■□□□□ 0.89
SKP2-201ENST00000274254 IDI2Q9BXS1 227 aa20.62■□□□□ 0.89
SKP2-201ENST00000274254 MKRN1Q9UHC7 482 aaKnown RBP20.62■□□□□ 0.89
SKP2-201ENST00000274254 CLRN2A0PK11 232 aa20.61■□□□□ 0.89
SKP2-201ENST00000274254 PATL2C9JE40 543 aaKnown RBP20.61■□□□□ 0.89
SKP2-201ENST00000274254 FKBP1CQ5VVH2 108 aa20.61■□□□□ 0.89
SKP2-201ENST00000274254 TGFBRAP1Q8WUH2 860 aa20.61■□□□□ 0.89
SKP2-201ENST00000274254 DSCC1Q9BVC3 393 aa20.61■□□□□ 0.89
SKP2-201ENST00000274254 LSG1Q9H089 658 aaKnown RBP20.61■□□□□ 0.89
SKP2-201ENST00000274254 ATP8A2Q9NTI2 1148 aa20.61■□□□□ 0.89
SKP2-201ENST00000274254 ASTN2O75129 1339 aaPredicted RBP20.6■□□□□ 0.89
SKP2-201ENST00000274254 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
SKP2-201ENST00000274254 REC8O95072 547 aa20.6■□□□□ 0.89
SKP2-201ENST00000274254 VEGFAP15692 232 aaPredicted RBP20.6■□□□□ 0.89
SKP2-201ENST00000274254 PTH1RQ03431 593 aa20.6■□□□□ 0.89
SKP2-201ENST00000274254 NFIAQ12857 509 aa20.6■□□□□ 0.89
SKP2-201ENST00000274254 KIAA1211Q6ZU35 1233 aa20.6■□□□□ 0.89
SKP2-201ENST00000274254 EPB41L4AQ9HCS5 686 aaPredicted RBP20.6■□□□□ 0.89
SKP2-201ENST00000274254 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
SKP2-201ENST00000274254 SEC24BO95487 1268 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 CACNB3P54284 484 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 GIMAP6Q6P9H5 292 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 PNMA8AQ86V59 439 aaPredicted RBP20.59■□□□□ 0.89
SKP2-201ENST00000274254 BACH2Q9BYV9 841 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 RRAGCQ9HB90 399 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 DCP1AQ9NPI6 582 aaPredicted RBP20.59■□□□□ 0.89
SKP2-201ENST00000274254 DDX4Q9NQI0 724 aaKnown RBP20.59■□□□□ 0.89
SKP2-201ENST00000274254 TMOD2Q9NZR1 351 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 FAM198AQ9UFP1 575 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 FLT1P17948 1338 aa20.59■□□□□ 0.89
SKP2-201ENST00000274254 EIF5BO60841 1220 aaKnown RBP20.58■□□□□ 0.89
SKP2-201ENST00000274254 USP5P45974 858 aa20.58■□□□□ 0.89
SKP2-201ENST00000274254 ALX1Q15699 326 aa20.58■□□□□ 0.89
SKP2-201ENST00000274254 MAP4K1Q92918 833 aa20.58■□□□□ 0.89
SKP2-201ENST00000274254 NMRK2Q9NPI5 230 aa20.58■□□□□ 0.89
SKP2-201ENST00000274254 EPB41L2O43491 1005 aaKnown RBP20.58■□□□□ 0.88
SKP2-201ENST00000274254 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.88
SKP2-201ENST00000274254 ZNF526Q8TF50 670 aaPredicted RBP20.58■□□□□ 0.88
SKP2-201ENST00000274254 ZC3H15Q8WU90 426 aaKnown RBP20.58■□□□□ 0.88
SKP2-201ENST00000274254 PGAP2Q9UHJ9 254 aa20.58■□□□□ 0.88
SKP2-201ENST00000274254 DDX60LQ5H9U9 1706 aaKnown RBP20.57■□□□□ 0.88
SKP2-201ENST00000274254 ZMYM6O95789 1325 aa20.57■□□□□ 0.88
SKP2-201ENST00000274254 PITPNM2Q9BZ72 1349 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms