RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ATG9AQ7Z3C6 839 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 TTC5Q8N0Z6 440 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 BPIFA3Q9BQP9 254 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 ANKRD65E5RJM6 399 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 H3BQF6 201 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 BMP6P22004 513 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 METTL16Q86W50 562 aaKnown RBP14.84□□□□□ -0.03
COL8A1-202ENST00000273342 PUS7LQ9H0K6 701 aaKnown RBP14.84□□□□□ -0.03
COL8A1-202ENST00000273342 ZBTB3Q9H5J0 574 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 N4BP2Q86UW6 1770 aaPredicted RBP14.84□□□□□ -0.03
COL8A1-202ENST00000273342 ANTXR2P58335 489 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 CCDC158Q5M9N0 1113 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 KLHL10Q6JEL2 608 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 TULP2O00295 520 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 CCP110O43303 1012 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 CBFA2T2O43439 604 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 GRIN1Q05586 938 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 SCARF1Q14162 830 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 SLC39A14Q15043 492 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 NFE2L3Q9Y4A8 694 aa14.84□□□□□ -0.03
COL8A1-202ENST00000273342 SOWAHDA6NJG2 315 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 IKBKBO14920 756 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 DHX16O60231 1041 aaKnown RBP14.83□□□□□ -0.04
COL8A1-202ENST00000273342 FMR1Q06787 632 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL8A1-202ENST00000273342 NCAPD2Q15021 1401 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 KRT40Q6A162 431 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 TMEM139Q8IV31 216 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 MRPL44Q9H9J2 332 aaKnown RBP14.83□□□□□ -0.04
COL8A1-202ENST00000273342 SAMSN1Q9NSI8 373 aaKnown RBP14.83□□□□□ -0.04
COL8A1-202ENST00000273342 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
COL8A1-202ENST00000273342 VPS18Q9P253 973 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 ARHGAP6O43182 974 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 N4BP1O75113 896 aaKnown RBP14.83□□□□□ -0.04
COL8A1-202ENST00000273342 RHOXF2BP0C7M4 288 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 STX17P56962 302 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 PDE4CQ08493 712 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 BRAPQ7Z569 592 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 RHOXF2Q9BQY4 288 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 ADAM21Q9UKJ8 722 aa14.83□□□□□ -0.04
COL8A1-202ENST00000273342 GPS2Q13227 327 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 LONRF2Q1L5Z9 754 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 CMTR1Q8N1G2 835 aaKnown RBP14.82□□□□□ -0.04
COL8A1-202ENST00000273342 RAPGEF4Q8WZA2 1011 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 PDE11AQ9HCR9 933 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 ANKARQ7Z5J8 1434 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 A0A0G2JS52 829 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 ZNF213O14771 459 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 FOXP2O15409 715 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 CCDC102BQ68D86 513 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 TTLL7Q6ZT98 887 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 TXLNBQ8N3L3 684 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 FUT8Q9BYC5 575 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 KCNH3Q9ULD8 1083 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 HEG1Q9ULI3 1381 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 MAP3K9P80192 1104 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 TTC39AQ5SRH9 613 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 GPR161Q8N6U8 529 aaKnown RBP14.82□□□□□ -0.04
COL8A1-202ENST00000273342 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
COL8A1-202ENST00000273342 PLEKHA4Q9H4M7 779 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 SLC52A2Q9HAB3 445 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
COL8A1-202ENST00000273342 CASP1P29466 404 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 TC2NQ8N9U0 490 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 KCNH5Q8NCM2 988 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 NCOA7Q8NI08 942 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 RSPH14Q9UHP6 348 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 ZAP70P43403 619 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 METAP2P50579 478 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL8A1-202ENST00000273342 RABL6Q3YEC7 729 aaPredicted RBP14.81□□□□□ -0.04
COL8A1-202ENST00000273342 MPHOSPH8Q99549 860 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 TUBE1Q9UJT0 475 aa14.81□□□□□ -0.04
COL8A1-202ENST00000273342 RGPD2P0DJD1 1756 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 POLR2DO15514 142 aaKnown RBP14.8□□□□□ -0.04
COL8A1-202ENST00000273342 KCNJ6P48051 423 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 FOXO4P98177 505 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 B4E1Z4 1266 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 TEX33O43247 280 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 FOXR1Q6PIV2 292 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 MB21D2Q8IYB1 491 aaPredicted RBP14.8□□□□□ -0.04
COL8A1-202ENST00000273342 GOLGA1Q92805 767 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 KCNJ14Q9UNX9 436 aa14.8□□□□□ -0.04
COL8A1-202ENST00000273342 ABL1P00519 1130 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 ARHGEF25Q86VW2 580 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
COL8A1-202ENST00000273342 TRDNQ13061 729 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 CYB5R4Q7L1T6 521 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 ANKLE2Q86XL3 938 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 SLC26A6Q9BXS9 759 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 C19orf44Q9H6X5 657 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 SERTAD1Q9UHV2 236 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 MYO1CO00159 1063 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 GPAA1O43292 621 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 TPM1P09493 284 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 CHMP4BP1P59074 171 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 ZNF569Q5MCW4 686 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 USP49Q70CQ1 688 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 KIFC2Q96AC6 838 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms