RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 SLC5A1P13866 664 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 PRKCSHP14314 528 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 BCAMP50895 628 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 KRT85P78386 507 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 TNNI3KQ59H18 835 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 RNF214Q8ND24 703 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 LPIN2Q92539 896 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 VPS33BQ9H267 617 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 BOLA2Q9H3K6 86 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 TLR7Q9NYK1 1049 aaKnown RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 TPCN1Q9ULQ1 816 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 FPGT-TNNI3KV9GXZ4 949 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 A0A1B0GUL6 1792 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 ZNF609O15014 1411 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 FIBPO43427 364 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 IFIT1P09914 478 aaKnown RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 FOXD4L6Q3SYB3 417 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 LARP1BQ659C4 914 aaKnown RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 FOXD4L3Q6VB84 417 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 C15orf52Q6ZUT6 534 aaKnown RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 ZNF526Q8TF50 670 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 FAM84BQ96KN1 310 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 NEUROD6Q96NK8 337 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 HAUS7Q99871 368 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 SCAND2PQ9GZW5 306 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 GPR108Q9NPR9 543 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 ZNRF3Q9ULT6 936 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 IQSEC3Q9UPP2 1182 aaPredicted RBP10.28□□□□□ -0.76
TRIM43-201ENST00000272395 JAG2Q9Y219 1238 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 VPS37CA5D8V6 355 aaPredicted RBP10.27□□□□□ -0.77
TRIM43-201ENST00000272395 FZD9O00144 591 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 PTMAP06454 111 aaKnown RBP10.27□□□□□ -0.77
TRIM43-201ENST00000272395 HIBADHP31937 336 aaKnown RBP10.27□□□□□ -0.77
TRIM43-201ENST00000272395 DNM1Q05193 864 aaKnown RBP10.27□□□□□ -0.77
TRIM43-201ENST00000272395 ST3GAL1Q11201 340 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 ZNF804AQ7Z570 1209 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 XAGE2Q96GT9 111 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 CD209Q9NNX6 404 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 DBNLQ9UJU6 430 aaKnown RBP10.27□□□□□ -0.77
TRIM43-201ENST00000272395 AKAP2Q9Y2D5 859 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 GJA3Q9Y6H8 435 aa10.27□□□□□ -0.77
TRIM43-201ENST00000272395 DDNO94850 711 aaPredicted RBP10.26□□□□□ -0.77
TRIM43-201ENST00000272395 HMGB1P09429 215 aaKnown RBP10.26□□□□□ -0.77
TRIM43-201ENST00000272395 YY1P25490 414 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 PHKA1P46020 1223 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 EIF6P56537 245 aaKnown RBP10.26□□□□□ -0.77
TRIM43-201ENST00000272395 CXCL9Q07325 125 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 CAVIN4Q5BKX8 364 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 FBXO33Q7Z6M2 555 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 VPS37DQ86XT2 251 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 DBNDD2Q9BQY9 259 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
TRIM43-201ENST00000272395 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 COA1Q9GZY4 146 aa10.26□□□□□ -0.77
TRIM43-201ENST00000272395 MYH7P12883 1935 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 PSMD14O00487 310 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 TPM3P06753 285 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 CCDC192P0DO97 292 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 TOB2Q14106 344 aaPredicted RBP10.25□□□□□ -0.77
TRIM43-201ENST00000272395 MCMDC2Q4G0Z9 681 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 NECAB1Q8N987 351 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 ZBTB12Q9Y330 459 aaPredicted RBP10.25□□□□□ -0.77
TRIM43-201ENST00000272395 TIAM2Q8IVF5 1701 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 SBF1O95248 1867 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 KDM4AO75164 1064 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 IL1R1P14778 569 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 GTF2IP78347 998 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 CHAF1AQ13111 956 aaPredicted RBP10.25□□□□□ -0.77
TRIM43-201ENST00000272395 GORABQ5T7V8 394 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 CIAPIN1Q6FI81 312 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 ZNF589Q86UQ0 364 aaPredicted RBP10.25□□□□□ -0.77
TRIM43-201ENST00000272395 KBTBD3Q8NAB2 608 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 NEK1Q96PY6 1258 aa10.25□□□□□ -0.77
TRIM43-201ENST00000272395 LLPHQ9BRT6 129 aaKnown RBP10.25□□□□□ -0.77
TRIM43-201ENST00000272395 COL1A1P02452 1464 aaPredicted RBP10.24□□□□□ -0.77
TRIM43-201ENST00000272395 USP17L3A6NCW0 530 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 USP17L4A6NCW7 530 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 GLTPD2A6NH11 291 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 HSP90AA2PQ14568 343 aaPredicted RBP10.24□□□□□ -0.77
TRIM43-201ENST00000272395 USP17L1Q7RTZ2 530 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 PODNQ7Z5L7 613 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 TDRD7Q8NHU6 1098 aaKnown RBP10.24□□□□□ -0.77
TRIM43-201ENST00000272395 GTF3C6Q969F1 213 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 HELLSQ9NRZ9 838 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 DDX19AQ9NUU7 478 aaKnown RBP10.24□□□□□ -0.77
TRIM43-201ENST00000272395 KIF3AQ9Y496 699 aa10.24□□□□□ -0.77
TRIM43-201ENST00000272395 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
TRIM43-201ENST00000272395 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 ADCY5O95622 1261 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 GMPSP49915 693 aaPredicted RBP10.23□□□□□ -0.77
TRIM43-201ENST00000272395 C1QBPQ07021 282 aaKnown RBP10.23□□□□□ -0.77
TRIM43-201ENST00000272395 SCARF1Q14162 830 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 TTLL5Q6EMB2 1281 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 PI16Q6UXB8 463 aa10.23□□□□□ -0.77
TRIM43-201ENST00000272395 CDC37L1Q7L3B6 337 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms