RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 FERP16591 822 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 EVCP57679 992 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 IGSF22Q8N9C0 903 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
LAMA3-201ENST00000269217 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
LAMA3-201ENST00000269217 CTNND2Q9UQB3 1225 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 ZNF75DP51815 510 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 PPP2R3AQ06190 1150 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 PUM3Q15397 648 aaKnown RBP11.5□□□□□ -0.57
LAMA3-201ENST00000269217 IMPACTQ9P2X3 320 aa11.5□□□□□ -0.57
LAMA3-201ENST00000269217 MTRF1LQ9UGC7 380 aaKnown RBP11.5□□□□□ -0.57
LAMA3-201ENST00000269217 TTF2Q9UNY4 1162 aaKnown RBP11.5□□□□□ -0.57
LAMA3-201ENST00000269217 KBTBD3Q8NAB2 608 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 FAM227BQ96M60 508 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 PAIP2Q9BPZ3 127 aaKnown RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 COMMD10Q9Y6G5 202 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 CCDC121Q6ZUS5 278 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 GSTA5Q7RTV2 222 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 UBE2Q2Q8WVN8 375 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 USP19O94966 1318 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 CCT6AP40227 531 aaKnown RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 TTC6Q86TZ1 520 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 MLKLQ8NB16 471 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 PLIN2Q99541 437 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 CBX8Q9HC52 389 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 FANCCQ00597 558 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 MSL1Q68DK7 614 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 IFT81Q8WYA0 676 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 NOC4LQ9BVI4 516 aaKnown RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 RTCBQ9Y3I0 505 aaKnown RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 KIF21AQ7Z4S6 1674 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 EEF2P13639 858 aaKnown RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 ITGA6P23229 1130 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 IPO4Q8TEX9 1081 aaKnown RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 XAGE2Q96GT9 111 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 NAPGQ99747 312 aaPredicted RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 SELENOSQ9BQE4 189 aa11.49□□□□□ -0.57
LAMA3-201ENST00000269217 NSFL1CQ9UNZ2 370 aaKnown RBP11.49□□□□□ -0.57
LAMA3-201ENST00000269217 UNC13AQ9UPW8 1703 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 TBC1D8BQ0IIM8 1120 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 VWA3BQ502W6 1294 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 CFAP58Q5T655 872 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 FAM76AQ8TAV0 307 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 LRRC45Q96CN5 670 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 PPP1R9BQ96SB3 815 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 LMBRD1Q9NUN5 540 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 KIAA0232Q92628 1395 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 GPAA1O43292 621 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 NLRP12P59046 1061 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 LETM2Q2VYF4 491 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 PARP10Q53GL7 1025 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 CYP26C1Q6V0L0 522 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 OTUD6BQ8N6M0 293 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 TM6SF1Q9BZW5 370 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 MTUS1Q9ULD2 1270 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 ZMYM3Q14202 1370 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 TCHPQ9BT92 498 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 NCOA5Q9HCD5 579 aaKnown RBP11.48□□□□□ -0.57
LAMA3-201ENST00000269217 ATP6V0A2Q9Y487 856 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 SYNRGQ9UMZ2 1314 aa11.48□□□□□ -0.57
LAMA3-201ENST00000269217 TRAF5O00463 557 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 MRPL12P52815 198 aaKnown RBP11.47□□□□□ -0.57
LAMA3-201ENST00000269217 PDE4DQ08499 809 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 PPP2R5BQ15173 497 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 CCDC6Q16204 474 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 CCDC50Q8IVM0 306 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 DIS3L2Q8IYB7 885 aaKnown RBP11.47□□□□□ -0.57
LAMA3-201ENST00000269217 GPATCH11Q8N954 259 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 GJC1P36383 396 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 SUCLG2Q96I99 432 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 B4DLN1 442 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 FAM173BQ6P4H8 233 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 MICALL1Q8N3F8 863 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 PLXNC1O60486 1568 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 PDE8AO60658 829 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 KCNA6P17658 529 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 VPS16Q9H269 839 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 ARMT1Q9H993 441 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 SH3TC1Q8TE82 1336 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 SSH2Q76I76 1423 aa11.47□□□□□ -0.57
LAMA3-201ENST00000269217 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.57
LAMA3-201ENST00000269217 ZNF202O95125 648 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 CPLX4Q7Z7G2 160 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 MSANTD4Q8NCY6 345 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 CCDC26Q8TAB7 109 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 KLHDC4Q8TBB5 520 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 EYA3Q99504 573 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 RRAGDQ9NQL2 400 aaPredicted RBP11.46□□□□□ -0.57
LAMA3-201ENST00000269217 PTPRTO14522 1441 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.57
LAMA3-201ENST00000269217 PLCB3Q01970 1234 aa11.46□□□□□ -0.57
LAMA3-201ENST00000269217 CALCOCO2Q13137 446 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms