RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SPTLC2O15270 562 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 CNPY2Q9Y2B0 182 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 RAD50Q92878 1312 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 LRRD1A4D1F6 860 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 RNF8O76064 485 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 DENND2CQ68D51 928 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
SRRM4-201ENST00000267260 VGLL3A8MV65 326 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 MCMDC2Q4G0Z9 681 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 ELP1O95163 1332 aa13.5□□□□□ -0.25
SRRM4-201ENST00000267260 KLF18A0A0U1RQI7 1052 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 CCDC125Q86Z20 511 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 MUM1L1Q5H9M0 696 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 PPP4R1Q8TF05 950 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 IMPACTQ9P2X3 320 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 KARSQ15046 597 aaKnown RBP13.49□□□□□ -0.25
SRRM4-201ENST00000267260 HHATQ5VTY9 493 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 CNNM4Q6P4Q7 775 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 SNX21Q969T3 373 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 PPP1R9AQ9ULJ8 1098 aa13.49□□□□□ -0.25
SRRM4-201ENST00000267260 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
SRRM4-201ENST00000267260 BAIAP2L1Q9UHR4 511 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 ANKRD20A3Q5VUR7 823 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 ZKSCAN3Q9BRR0 538 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 KRT3P12035 628 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 GOLGA8QA0A0J9YX86 632 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 GOLGA8OA6NCC3 632 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
SRRM4-201ENST00000267260 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
SRRM4-201ENST00000267260 GOLGA8NF8WBI6 632 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
SRRM4-201ENST00000267260 PLCG2P16885 1265 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 SMTNP53814 917 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 NUCB1Q02818 461 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 NOC2LQ9Y3T9 749 aaKnown RBP13.48□□□□□ -0.25
SRRM4-201ENST00000267260 CALUO43852 315 aaPredicted RBP13.48□□□□□ -0.25
SRRM4-201ENST00000267260 SDCCAG3Q96C92 435 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 IL16Q14005 1332 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 MCM10Q7L590 875 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 DPH6Q7L8W6 267 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 IQUBQ8NA54 791 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 C6orf229H3BNL8 230 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 IGSF3O75054 1194 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 RASA3Q14644 834 aa13.48□□□□□ -0.25
SRRM4-201ENST00000267260 SPOPO43791 374 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 KRT5P13647 590 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 MCM7P33993 719 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 PHEXP78562 749 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 DDX21Q9NR30 783 aaKnown RBP eCLIP13.47□□□□□ -0.25
SRRM4-201ENST00000267260 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 F13A1P00488 732 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 PEX19P40855 299 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 LEO1Q8WVC0 666 aaPredicted RBP13.47□□□□□ -0.25
SRRM4-201ENST00000267260 PSPC1Q8WXF1 523 aaKnown RBP13.47□□□□□ -0.25
SRRM4-201ENST00000267260 DRC3Q9H069 523 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 RAB17Q9H0T7 212 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
SRRM4-201ENST00000267260 TOP2BQ02880 1626 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 STK38LQ9Y2H1 464 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 ZNF644Q9H582 1327 aaPredicted RBP13.47□□□□□ -0.25
SRRM4-201ENST00000267260 ASXL1Q8IXJ9 1541 aa13.47□□□□□ -0.25
SRRM4-201ENST00000267260 CHMP2AO43633 222 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 PPFIA4O75335 1185 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 PPP2R5EQ16537 467 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 RIPOR2Q9Y4F9 1068 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
SRRM4-201ENST00000267260 HSP90AA4PQ58FG1 418 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 MAIP1Q8WWC4 291 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 IQCDQ96DY2 449 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 Q6ZUG5 572 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 NSMCE1Q8WV22 266 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 P3H4Q92791 437 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 RILPQ96NA2 401 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 DCAF17Q5H9S7 520 aaPredicted RBP13.46□□□□□ -0.25
SRRM4-201ENST00000267260 TRMT1LQ7Z2T5 733 aaKnown RBP13.46□□□□□ -0.25
SRRM4-201ENST00000267260 MX2P20592 715 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 HAND2P61296 217 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 DHX58Q96C10 678 aa13.46□□□□□ -0.25
SRRM4-201ENST00000267260 DAPK3O43293 454 aa13.46□□□□□ -0.26
SRRM4-201ENST00000267260 TRIM27P14373 513 aa13.46□□□□□ -0.26
SRRM4-201ENST00000267260 PPP1R21Q6ZMI0 780 aa13.46□□□□□ -0.26
SRRM4-201ENST00000267260 RNF40O75150 1001 aa13.46□□□□□ -0.26
SRRM4-201ENST00000267260 KIF11P52732 1056 aa13.46□□□□□ -0.26
SRRM4-201ENST00000267260 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.26
SRRM4-201ENST00000267260 RASIP1Q5U651 963 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms