RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 HAUS2Q9NVX0 235 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 DENND2AQ9ULE3 1009 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
CCDC6-201ENST00000263102 PLCB4Q15147 1175 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 GRM8O00222 908 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 MBD4O95243 580 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
CCDC6-201ENST00000263102 SV2BQ7L1I2 683 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 NOX5Q96PH1 765 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 TFCP2Q12800 502 aa16.69■□□□□ 0.26
CCDC6-201ENST00000263102 NAP1L4Q99733 375 aaKnown RBP16.69■□□□□ 0.26
CCDC6-201ENST00000263102 TNRQ92752 1358 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 YARSP54577 528 aaKnown RBP16.68■□□□□ 0.26
CCDC6-201ENST00000263102 LIN9Q5TKA1 542 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 SKAP1Q86WV1 359 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 TTC30BQ8N4P2 665 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 CCDC42Q96M95 316 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 EXOC7Q9UPT5 735 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 RBM8AQ9Y5S9 174 aaKnown RBP16.68■□□□□ 0.26
CCDC6-201ENST00000263102 CTAGE15A4D2H0 777 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 CTAGE8P0CG41 777 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 RPL13P26373 211 aaKnown RBP16.68■□□□□ 0.26
CCDC6-201ENST00000263102 PDE6BP35913 854 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
CCDC6-201ENST00000263102 CLUL1Q15846 466 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 GIMAP6Q6P9H5 292 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 CTAGE6Q86UF2 777 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 CTAGE4Q8IX94 777 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 GOLGA6CA6NDK9 693 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 GOLGA6BA6NDN3 693 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 RNF113AO15541 343 aaKnown RBP16.68■□□□□ 0.26
CCDC6-201ENST00000263102 CFBP00751 764 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 GOLGA6DP0CG33 693 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 USP48Q86UV5 1035 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 TTC14Q96N46 770 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 GOLGA6AQ9NYA3 693 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 FAM135AQ9P2D6 1515 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 TRAF5O00463 557 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 SEPT14Q6ZU15 432 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 GPIHBP1Q8IV16 184 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 GUCA1BQ9UMX6 200 aa16.68■□□□□ 0.26
CCDC6-201ENST00000263102 IGBP1P78318 339 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 FNDC3AQ9Y2H6 1198 aaKnown RBP16.67■□□□□ 0.26
CCDC6-201ENST00000263102 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC6-201ENST00000263102 PPFIA1Q13136 1202 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 Q3C1V9 767 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC6-201ENST00000263102 ADGRF5Q8IZF2 1346 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 MTUS1Q9ULD2 1270 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 UTP14CQ5TAP6 766 aaKnown RBP16.67■□□□□ 0.26
CCDC6-201ENST00000263102 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 UBLCP1Q8WVY7 318 aaPredicted RBP16.67■□□□□ 0.26
CCDC6-201ENST00000263102 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC6-201ENST00000263102 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 VWA3AA6NCI4 1184 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 CALCOCO2Q13137 446 aa16.67■□□□□ 0.26
CCDC6-201ENST00000263102 ZSCAN16Q9H4T2 348 aaPredicted RBP16.67■□□□□ 0.26
CCDC6-201ENST00000263102 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 SKIV2LQ15477 1246 aaKnown RBP16.66■□□□□ 0.26
CCDC6-201ENST00000263102 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 TCP10L2B9ZVM9 353 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 DNAJC21Q5F1R6 531 aaKnown RBP16.66■□□□□ 0.26
CCDC6-201ENST00000263102 NAA25Q14CX7 972 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 CCDC110Q8TBZ0 833 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 CCDC141Q6ZP82 1450 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 GABPB2Q8TAK5 448 aaPredicted RBP16.66■□□□□ 0.26
CCDC6-201ENST00000263102 APOL6Q9BWW8 343 aa16.66■□□□□ 0.26
CCDC6-201ENST00000263102 FMNL3Q8IVF7 1028 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
CCDC6-201ENST00000263102 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 CTNND2Q9UQB3 1225 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 SPDYE2BA6NHP3 402 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 SPDYE6P0CI01 402 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 RAD51AP2Q09MP3 1159 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 CWF19L2Q2TBE0 894 aaKnown RBP16.65■□□□□ 0.26
CCDC6-201ENST00000263102 MAST3O60307 1309 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 PCDH11XQ9BZA7 1347 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 PCDH11YQ9BZA8 1340 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 NEMFO60524 1076 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 ZNF830Q96NB3 372 aaPredicted RBP16.65■□□□□ 0.26
CCDC6-201ENST00000263102 STIM2Q9P246 746 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 MTRF1LQ9UGC7 380 aaKnown RBP16.65■□□□□ 0.26
CCDC6-201ENST00000263102 TXKP42681 527 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
CCDC6-201ENST00000263102 ANO6Q4KMQ2 910 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 ERCC3P19447 782 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
CCDC6-201ENST00000263102 SULF1Q8IWU6 871 aa16.65■□□□□ 0.26
CCDC6-201ENST00000263102 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
CCDC6-201ENST00000263102 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
CCDC6-201ENST00000263102 PPP1R12AO14974 1030 aaPredicted RBP16.64■□□□□ 0.25
CCDC6-201ENST00000263102 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
CCDC6-201ENST00000263102 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms