RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 A0A1B0GUL7 405 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 GYS1P13807 737 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 TDO2P48775 406 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 IMMTQ16891 758 aaKnown RBP11.03□□□□□ -0.64
SIM1-201ENST00000262901 LRRC24Q50LG9 513 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 AOX1Q06278 1338 aa11.03□□□□□ -0.64
SIM1-201ENST00000262901 CCDC69A6NI79 296 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 CASP7P55210 303 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 FAM173BQ6P4H8 233 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 FSIP1Q8NA03 581 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 CCDC47Q96A33 483 aaKnown RBP11.02□□□□□ -0.64
SIM1-201ENST00000262901 C8orf76Q96K31 380 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 BRMS1Q9HCU9 246 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 CTNNA3Q9UI47 895 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.64
SIM1-201ENST00000262901 SHANK3Q9BYB0 1731 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 CSF1RP07333 972 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 UQCRFS1P1P0C7P4 283 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 PKP1Q13835 747 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 PUM3Q15397 648 aaKnown RBP11.02□□□□□ -0.65
SIM1-201ENST00000262901 COL23A1Q86Y22 540 aaPredicted RBP11.02□□□□□ -0.65
SIM1-201ENST00000262901 CCDC144CPQ8IYA2 1237 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 SEC31BQ9NQW1 1179 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 RSPH14Q9UHP6 348 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 C5P01031 1676 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 TIMM10P62072 90 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 PTPN14Q15678 1187 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 NEK1Q96PY6 1258 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 PUS3Q9BZE2 481 aaKnown RBP11.02□□□□□ -0.65
SIM1-201ENST00000262901 DACT1Q9NYF0 836 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 LAMB4A4D0S4 1761 aa11.02□□□□□ -0.65
SIM1-201ENST00000262901 GPR108Q9NPR9 543 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 H0YIN7 160 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 EAF2Q96CJ1 260 aaPredicted RBP11.01□□□□□ -0.65
SIM1-201ENST00000262901 DBNDD2Q9BQY9 259 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 GSPT1P15170 499 aaKnown RBP11.01□□□□□ -0.65
SIM1-201ENST00000262901 SFPQP23246 707 aaKnown RBP eCLIP11.01□□□□□ -0.65
SIM1-201ENST00000262901 ZNF827Q17R98 1081 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 KLHL10Q6JEL2 608 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 VIRMAQ69YN4 1812 aaKnown RBP11.01□□□□□ -0.65
SIM1-201ENST00000262901 C6orf229H3BNL8 230 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 SASH1O94885 1247 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 F13A1P00488 732 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 RBM5P52756 815 aaKnown RBP eCLIP11.01□□□□□ -0.65
SIM1-201ENST00000262901 SF3B3Q15393 1217 aaKnown RBP11.01□□□□□ -0.65
SIM1-201ENST00000262901 CCDC70Q6NSX1 233 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 ZSCAN25Q6NSZ9 544 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 LPIN2Q92539 896 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 AIDAQ96BJ3 306 aa11.01□□□□□ -0.65
SIM1-201ENST00000262901 CCDC189A1A4V9 331 aa11□□□□□ -0.65
SIM1-201ENST00000262901 ALDH1B1P30837 517 aa11□□□□□ -0.65
SIM1-201ENST00000262901 CCDC186Q7Z3E2 898 aa11□□□□□ -0.65
SIM1-201ENST00000262901 LRP2BPQ9P2M1 347 aa11□□□□□ -0.65
SIM1-201ENST00000262901 GOLGA8BA8MQT2 603 aa11□□□□□ -0.65
SIM1-201ENST00000262901 CD2BP2O95400 341 aaKnown RBP11□□□□□ -0.65
SIM1-201ENST00000262901 SYT1P21579 422 aa11□□□□□ -0.65
SIM1-201ENST00000262901 FILIP1LQ4L180 1135 aa11□□□□□ -0.65
SIM1-201ENST00000262901 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
SIM1-201ENST00000262901 NACAP1Q9BZK3 213 aa11□□□□□ -0.65
SIM1-201ENST00000262901 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
SIM1-201ENST00000262901 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
SIM1-201ENST00000262901 ERICH4A6NGS2 130 aa11□□□□□ -0.65
SIM1-201ENST00000262901 MINDY4BA8MYZ0 360 aa11□□□□□ -0.65
SIM1-201ENST00000262901 NMIQ13287 307 aaPredicted RBP11□□□□□ -0.65
SIM1-201ENST00000262901 BIRC2Q13490 618 aa11□□□□□ -0.65
SIM1-201ENST00000262901 HSP90AA4PQ58FG1 418 aa11□□□□□ -0.65
SIM1-201ENST00000262901 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
SIM1-201ENST00000262901 PROM2Q8N271 834 aa11□□□□□ -0.65
SIM1-201ENST00000262901 ANO10Q9NW15 660 aa11□□□□□ -0.65
SIM1-201ENST00000262901 PDE8BO95263 885 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 NOLC1Q14978 699 aaKnown RBP eCLIP10.99□□□□□ -0.65
SIM1-201ENST00000262901 SLC10A5Q5PT55 438 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 SLC16A10Q8TF71 515 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 XAGE2Q96GT9 111 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 CAMKK2Q96RR4 588 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 DDX19AQ9NUU7 478 aaKnown RBP10.99□□□□□ -0.65
SIM1-201ENST00000262901 NHSQ6T4R5 1651 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 TAF5LO75529 589 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 RFX5P48382 616 aaPredicted RBP10.99□□□□□ -0.65
SIM1-201ENST00000262901 ANO6Q4KMQ2 910 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 CAGE1Q8TC20 777 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 UBAC1Q9BSL1 405 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 STAP2Q9UGK3 403 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 CHRNDQ07001 517 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 C2CD5Q86YS7 1000 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 DNAJC25Q9H1X3 360 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
SIM1-201ENST00000262901 CCDC66A2RUB6 948 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 TTF1Q15361 905 aaPredicted RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 RINLQ6ZS11 566 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 CCAR1Q8IX12 1150 aaKnown RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
SIM1-201ENST00000262901 ZNF219Q9P2Y4 722 aaPredicted RBP10.98□□□□□ -0.65
SIM1-201ENST00000262901 BTAF1O14981 1849 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms