RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 DBNDD1Q9H9R9 158 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 LAMA4Q16363 1823 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 ECE2O60344 883 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 PTGER2P43116 358 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 PPP4CP60510 307 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 NCOA7Q8NI08 942 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 SDR42E1Q8WUS8 393 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 FAM163AQ96GL9 167 aaPredicted RBP15.42■□□□□ 0.06
VAMP7-201ENST00000262640 NBPF3Q9H094 633 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
VAMP7-201ENST00000262640 CHMP5Q9NZZ3 219 aa15.42■□□□□ 0.06
VAMP7-201ENST00000262640 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
VAMP7-201ENST00000262640 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
VAMP7-201ENST00000262640 EXOSC10Q01780 885 aaKnown RBP15.41■□□□□ 0.06
VAMP7-201ENST00000262640 TRDNQ13061 729 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 AOC3Q16853 763 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 DALRD3Q5D0E6 543 aaKnown RBP15.41■□□□□ 0.06
VAMP7-201ENST00000262640 RALYLQ86SE5 291 aaKnown RBP15.41■□□□□ 0.06
VAMP7-201ENST00000262640 TBC1D10CQ8IV04 446 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 INTS4Q96HW7 963 aaKnown RBP15.41■□□□□ 0.06
VAMP7-201ENST00000262640 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
VAMP7-201ENST00000262640 ATP8A2Q9NTI2 1148 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 PPIP5K2O43314 1243 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 TOB2Q14106 344 aaPredicted RBP15.41■□□□□ 0.06
VAMP7-201ENST00000262640 TCEANC2Q96MN5 208 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
VAMP7-201ENST00000262640 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 Q6ZUG5 572 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 PPP1R1BQ9UD71 204 aaPredicted RBP15.4■□□□□ 0.06
VAMP7-201ENST00000262640 GAKO14976 1311 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 CHD4Q14839 1912 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 MB21D2Q8IYB1 491 aaPredicted RBP15.4■□□□□ 0.06
VAMP7-201ENST00000262640 CERS5Q8N5B7 392 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
VAMP7-201ENST00000262640 GPR75-ASB3A0A0A6YYF3 556 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 PLCG2P16885 1265 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 MCM5P33992 734 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 FGD1P98174 961 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 PPARAQ07869 468 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 CNNM2Q9H8M5 875 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 USP17L3A6NCW0 530 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 USP17L4A6NCW7 530 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 BTDP43251 543 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 AKNAD1Q5T1N1 836 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 USP17L1Q7RTZ2 530 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 FBXL16Q8N461 479 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 STAG1Q8WVM7 1258 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 LARP6Q9BRS8 491 aaKnown RBP15.39■□□□□ 0.05
VAMP7-201ENST00000262640 AGXT2Q9BYV1 514 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 RNF41Q9H4P4 317 aaPredicted RBP15.39■□□□□ 0.05
VAMP7-201ENST00000262640 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
VAMP7-201ENST00000262640 TPCN1Q9ULQ1 816 aa15.39■□□□□ 0.05
VAMP7-201ENST00000262640 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
VAMP7-201ENST00000262640 DACT2Q5SW24 774 aa15.38■□□□□ 0.05
VAMP7-201ENST00000262640 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
VAMP7-201ENST00000262640 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
VAMP7-201ENST00000262640 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
VAMP7-201ENST00000262640 KRT23Q9C075 422 aa15.38■□□□□ 0.05
VAMP7-201ENST00000262640 TTF2Q9UNY4 1162 aaKnown RBP15.38■□□□□ 0.05
VAMP7-201ENST00000262640 PRC1O43663 620 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 LARGE1O95461 756 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 ME3Q16798 604 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 KCNQ5Q9NR82 932 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 ARPP21Q9UBL0 812 aaPredicted RBP15.37■□□□□ 0.05
VAMP7-201ENST00000262640 MYH2Q9UKX2 1941 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 NEDD4P46934 1319 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 PCP11498 1178 aaKnown RBP15.37■□□□□ 0.05
VAMP7-201ENST00000262640 USP5P45974 858 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 SBK1Q52WX2 424 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 BRF1Q92994 677 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 DAGLAQ9Y4D2 1042 aa15.37■□□□□ 0.05
VAMP7-201ENST00000262640 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.37■□□□□ 0.05
VAMP7-201ENST00000262640 HHIPL2Q6UWX4 724 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 LARGE2Q8N3Y3 721 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 SPON1Q9HCB6 807 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 BRCA1P38398 1863 aaKnown RBP15.36■□□□□ 0.05
VAMP7-201ENST00000262640 USP17L12C9JPN9 530 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 USP17L21D6R901 530 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 F8W031 263 aaPredicted RBP15.36■□□□□ 0.05
VAMP7-201ENST00000262640 ANTXR2P58335 489 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 MRIQ9BWK5 157 aa15.36■□□□□ 0.05
VAMP7-201ENST00000262640 ZNF277Q9NRM2 450 aaPredicted RBP15.36■□□□□ 0.05
VAMP7-201ENST00000262640 MKRN1Q9UHC7 482 aaKnown RBP15.36■□□□□ 0.05
VAMP7-201ENST00000262640 B4E1Z4 1266 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 CHST3Q7LGC8 479 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 TEX11Q8IYF3 940 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 TEKT1Q969V4 418 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 YDJCA8MPS7 323 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 SLC3A2P08195 630 aaKnown RBP15.35■□□□□ 0.05
VAMP7-201ENST00000262640 RHBDL3P58872 404 aa15.35■□□□□ 0.05
VAMP7-201ENST00000262640 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
VAMP7-201ENST00000262640 CCDC83Q8IWF9 413 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms