RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 CSPP1Q1MSJ5 1256 aa28.21■■■□□ 2.11
TSPAN13-201ENST00000262067 PANK2Q9BZ23 570 aa28.21■■■□□ 2.11
TSPAN13-201ENST00000262067 KRT85P78386 507 aa28.2■■■□□ 2.11
TSPAN13-201ENST00000262067 NSUN4Q96CB9 384 aaKnown RBP28.2■■■□□ 2.11
TSPAN13-201ENST00000262067 MECOMQ03112 1051 aa28.2■■■□□ 2.1
TSPAN13-201ENST00000262067 RESTQ13127 1097 aa28.2■■■□□ 2.1
TSPAN13-201ENST00000262067 IGDCC4Q8TDY8 1250 aa28.2■■■□□ 2.1
TSPAN13-201ENST00000262067 KIF3AQ9Y496 699 aa28.2■■■□□ 2.1
TSPAN13-201ENST00000262067 XDHP47989 1333 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 FDPSP14324 419 aaKnown RBP28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 FOSBP53539 338 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 ZNF827Q17R98 1081 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 TPRNQ4KMQ1 711 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 MFSD6Q6ZSS7 791 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 TMEM87BQ96K49 555 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 ZSWIM5Q9P217 1185 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 PLSCR1O15162 318 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 KDM4AO75164 1064 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 STAG1Q8WVM7 1258 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 RBM17Q96I25 401 aaKnown RBP28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 CNNM2Q9H8M5 875 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 SENP2Q9HC62 589 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 JAG2Q9Y219 1238 aa28.19■■■□□ 2.1
TSPAN13-201ENST00000262067 APBA3O96018 575 aa28.18■■■□□ 2.1
TSPAN13-201ENST00000262067 HMGB2P26583 209 aaKnown RBP28.18■■■□□ 2.1
TSPAN13-201ENST00000262067 SYCE3A1L190 88 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 DHX16O60231 1041 aaKnown RBP28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 PRDX5P30044 214 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 KRT23Q9C075 422 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 TIAM2Q8IVF5 1701 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 ZBTB22O15209 634 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 GPSM2P81274 684 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 PPARAQ07869 468 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 TTC6Q86TZ1 520 aa28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 TFIP11Q9UBB9 837 aaKnown RBP28.17■■■□□ 2.1
TSPAN13-201ENST00000262067 STK11IPQ8N1F8 1099 aa28.16■■■□□ 2.1
TSPAN13-201ENST00000262067 SYAP1Q96A49 352 aaPredicted RBP28.16■■■□□ 2.1
TSPAN13-201ENST00000262067 ZSCAN16Q9H4T2 348 aaPredicted RBP28.16■■■□□ 2.1
TSPAN13-201ENST00000262067 LY9Q9HBG7 655 aa28.16■■■□□ 2.1
TSPAN13-201ENST00000262067 TMEM67Q5HYA8 995 aa28.15■■■□□ 2.1
TSPAN13-201ENST00000262067 AKT1S1Q96B36 256 aa28.15■■■□□ 2.1
TSPAN13-201ENST00000262067 GPR101Q96P66 508 aaPredicted RBP28.15■■■□□ 2.1
TSPAN13-201ENST00000262067 MINDY4BA8MYZ0 360 aa28.15■■■□□ 2.1
TSPAN13-201ENST00000262067 RRP12Q5JTH9 1297 aaKnown RBP28.15■■■□□ 2.1
TSPAN13-201ENST00000262067 APOA5Q6Q788 366 aa28.14■■■□□ 2.1
TSPAN13-201ENST00000262067 TOMM22Q9NS69 142 aa28.14■■■□□ 2.1
TSPAN13-201ENST00000262067 CPLX1O14810 134 aa28.14■■■□□ 2.09
TSPAN13-201ENST00000262067 HOXA10P31260 410 aaPredicted RBP28.14■■■□□ 2.09
TSPAN13-201ENST00000262067 LRSAM1Q6UWE0 723 aa28.14■■■□□ 2.09
TSPAN13-201ENST00000262067 COL23A1Q86Y22 540 aaPredicted RBP28.14■■■□□ 2.09
TSPAN13-201ENST00000262067 TDRD7Q8NHU6 1098 aaKnown RBP28.14■■■□□ 2.09
TSPAN13-201ENST00000262067 MYH13Q9UKX3 1938 aa28.13■■■□□ 2.09
TSPAN13-201ENST00000262067 IFIT3O14879 490 aaKnown RBP28.13■■■□□ 2.09
TSPAN13-201ENST00000262067 C15orf52Q6ZUT6 534 aaKnown RBP28.13■■■□□ 2.09
TSPAN13-201ENST00000262067 SGMS1Q86VZ5 419 aa28.13■■■□□ 2.09
TSPAN13-201ENST00000262067 BRIP1Q9BX63 1249 aa28.13■■■□□ 2.09
TSPAN13-201ENST00000262067 ANAPC4Q9UJX5 808 aa28.13■■■□□ 2.09
TSPAN13-201ENST00000262067 KLRG2A4D1S0 409 aaPredicted RBP28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 SMIM22K7EJ46 135 aa28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 BBOX1O75936 387 aa28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 METAP2P50579 478 aaKnown RBP eCLIP28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 NFXL1Q6ZNB6 911 aa28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 SCAND2PQ9GZW5 306 aaPredicted RBP28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 RNF41Q9H4P4 317 aaPredicted RBP28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 ELP1O95163 1332 aa28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 RXRAP19793 462 aa28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 LIFRP42702 1097 aa28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 GUCY1B3Q02153 619 aa28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 AATFQ9NY61 560 aaKnown RBP eCLIP28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 ORC3Q9UBD5 711 aaPredicted RBP28.12■■■□□ 2.09
TSPAN13-201ENST00000262067 ADD1P35611 737 aaKnown RBP28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 ZNF804AQ7Z570 1209 aa28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 CHD4Q14839 1912 aa28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 UFL1O94874 794 aa28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 RXRBP28702 533 aa28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 SPTY2D1Q68D10 685 aaPredicted RBP28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 SPATA32Q96LK8 384 aa28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 CRAMP1Q96RY5 1269 aa28.11■■■□□ 2.09
TSPAN13-201ENST00000262067 WDR66Q8TBY9 1149 aa28.1■■■□□ 2.09
TSPAN13-201ENST00000262067 LEO1Q8WVC0 666 aaPredicted RBP28.1■■■□□ 2.09
TSPAN13-201ENST00000262067 ZKSCAN3Q9BRR0 538 aa28.1■■■□□ 2.09
TSPAN13-201ENST00000262067 CYP2D7A0A087X1C5 515 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 ZBTB43O43298 467 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 ATP2B4P23634 1241 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 GIMAP6Q6P9H5 292 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 MICU3Q86XE3 530 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 NLGN1Q8N2Q7 840 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 RBSNQ9H1K0 784 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 CDC27P30260 824 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 DZIP1Q86YF9 867 aaKnown RBP28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 MYL10Q9BUA6 226 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 GGA1Q9UJY5 639 aa28.09■■■□□ 2.09
TSPAN13-201ENST00000262067 CCDC183Q5T5S1 534 aa28.08■■■□□ 2.09
TSPAN13-201ENST00000262067 CTR9Q6PD62 1173 aa28.08■■■□□ 2.09
TSPAN13-201ENST00000262067 TMED8Q6PL24 325 aaPredicted RBP28.08■■■□□ 2.09
TSPAN13-201ENST00000262067 CCDC144CPQ8IYA2 1237 aa28.08■■■□□ 2.09
TSPAN13-201ENST00000262067 CCDC69A6NI79 296 aa28.07■■■□□ 2.08
TSPAN13-201ENST00000262067 OTUD7BQ6GQQ9 843 aa28.07■■■□□ 2.08
TSPAN13-201ENST00000262067 SLC12A7Q9Y666 1083 aa28.07■■■□□ 2.08
TSPAN13-201ENST00000262067 C8orf76Q96K31 380 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms