RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 FRMPD2Q68DX3 1309 aaPredicted RBP13.74□□□□□ -0.21
SPG11-201ENST00000261866 GNA11P29992 359 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 USP37Q86T82 979 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 TTC41PQ6P2S7 1318 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 GPAA1O43292 621 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 CNGA1P29973 690 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 GSDMDP57764 484 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■□□□□ 9.9
SPG11-201ENST00000261866 RNF34Q969K3 372 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 LZTFL1Q9NQ48 299 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 CALML3P27482 149 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 BAG6P46379 1132 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 SMCR8Q8TEV9 937 aaPredicted RBP13.73□□□□□ -0.21
SPG11-201ENST00000261866 ZNF496Q96IT1 587 aaPredicted RBP13.73□□□□□ -0.21
SPG11-201ENST00000261866 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
SPG11-201ENST00000261866 SYT1P21579 422 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 SPATA5Q8NB90 893 aa13.73□□□□□ -0.21
SPG11-201ENST00000261866 SEC24BO95487 1268 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 IL13P35225 146 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 MKRN3Q13064 507 aaKnown RBP13.72□□□□□ -0.21
SPG11-201ENST00000261866 MRRFQ96E11 262 aaKnown RBP13.72□□□□□ -0.21
SPG11-201ENST00000261866 QTRT2Q9H974 415 aaKnown RBP13.72□□□□□ -0.21
SPG11-201ENST00000261866 GUCA1BQ9UMX6 200 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 SH3BP5O60239 455 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 PSMC4P43686 418 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 PNMA6EA0A0J9YXQ4 647 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 CCDC172P0C7W6 258 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 GYG1P46976 350 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 RNASE9P60153 205 aaKnown RBP13.72□□□□□ -0.21
SPG11-201ENST00000261866 RASA3Q14644 834 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 CCDC186Q7Z3E2 898 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 TRAF1Q13077 416 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
SPG11-201ENST00000261866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
SPG11-201ENST00000261866 DYMQ7RTS9 669 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 ZNF532Q9HCE3 1301 aa13.72□□□□□ -0.21
SPG11-201ENST00000261866 DLGAP5Q15398 846 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 PARP10Q53GL7 1025 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 GADL1Q6ZQY3 521 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 HS2ST1Q7LGA3 356 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 CCDC25Q86WR0 208 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 NEK11Q8NG66 645 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 CCDC114Q96M63 670 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
SPG11-201ENST00000261866 SLC1A4P43007 532 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 FAM47CQ5HY64 1035 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 FAM173BQ6P4H8 233 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 RNF169Q8NCN4 708 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 FNBP1Q96RU3 617 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 KCNJ14Q9UNX9 436 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 SLC27A2O14975 620 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 ANO3Q9BYT9 981 aa13.71□□□□□ -0.21
SPG11-201ENST00000261866 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.22
SPG11-201ENST00000261866 SKILP12757 684 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 TRAF5O00463 557 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 FERP16591 822 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 SH2D4AQ9H788 454 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 KRT19P08727 400 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 SV2BQ7L1I2 683 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 CYLC1P35663 651 aaPredicted RBP13.7□□□□□ -0.22
SPG11-201ENST00000261866 MXRA7P84157 204 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 TTLL7Q6ZT98 887 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 HELLSQ9NRZ9 838 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 KIF2AO00139 706 aaPredicted RBP13.7□□□□□ -0.22
SPG11-201ENST00000261866 BMP15O95972 392 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 STAMQ92783 540 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
SPG11-201ENST00000261866 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
SPG11-201ENST00000261866 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 CTAGE1Q96RT6 745 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
SPG11-201ENST00000261866 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.69□□□□□ -0.22
SPG11-201ENST00000261866 KIAA0556O60303 1618 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 IFI16Q16666 785 aaKnown RBP13.69□□□□□ -0.22
SPG11-201ENST00000261866 TESK2Q96S53 571 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
SPG11-201ENST00000261866 PDE4DQ08499 809 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 LTKP29376 864 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 GTF2F1P35269 517 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPG11-201ENST00000261866 BCAMP50895 628 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 ZBTB40Q9NUA8 1239 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 FRMD4BQ9Y2L6 1034 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 ZBED4O75132 1171 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 PPP2R5DQ14738 602 aa13.69□□□□□ -0.22
SPG11-201ENST00000261866 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
SPG11-201ENST00000261866 MFSD14BQ5SR56 506 aa13.68□□□□□ -0.22
SPG11-201ENST00000261866 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
SPG11-201ENST00000261866 METTL13Q8N6R0 699 aa13.68□□□□□ -0.22
SPG11-201ENST00000261866 SDR42E1Q8WUS8 393 aa13.68□□□□□ -0.22
SPG11-201ENST00000261866 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms