RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CERS3Q8IU89 383 aa22.75■■□□□ 1.23
CYSTM1-201ENST00000261811 PIH1D3Q9NQM4 214 aaKnown RBP22.75■■□□□ 1.23
CYSTM1-201ENST00000261811 PLCG2P16885 1265 aa22.74■■□□□ 1.23
CYSTM1-201ENST00000261811 ZSCAN25Q6NSZ9 544 aa22.74■■□□□ 1.23
CYSTM1-201ENST00000261811 DEFB129Q9H1M3 183 aa22.74■■□□□ 1.23
CYSTM1-201ENST00000261811 ZNF408Q9H9D4 720 aa22.74■■□□□ 1.23
CYSTM1-201ENST00000261811 USP40Q9NVE5 1235 aa22.74■■□□□ 1.23
CYSTM1-201ENST00000261811 NDUFB9Q9Y6M9 179 aa22.74■■□□□ 1.23
CYSTM1-201ENST00000261811 GPR75-ASB3A0A0A6YYF3 556 aa22.73■■□□□ 1.23
CYSTM1-201ENST00000261811 CELF2O95319 508 aaKnown RBP22.73■■□□□ 1.23
CYSTM1-201ENST00000261811 BTDP43251 543 aa22.73■■□□□ 1.23
CYSTM1-201ENST00000261811 LRRFIP1Q32MZ4 808 aaKnown RBP22.73■■□□□ 1.23
CYSTM1-201ENST00000261811 CDCA5Q96FF9 252 aa22.73■■□□□ 1.23
CYSTM1-201ENST00000261811 ANTXR1Q9H6X2 564 aa22.73■■□□□ 1.23
CYSTM1-201ENST00000261811 CREBZFQ9NS37 354 aa22.73■■□□□ 1.23
CYSTM1-201ENST00000261811 TCP10L2B9ZVM9 353 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 CYP7A1P22680 504 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 SUPT20HL1Q3ZLR7 823 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 FAM83AQ86UY5 434 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 MAGEB6Q8N7X4 407 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 C2orf69Q8N8R5 385 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 HOOK2Q96ED9 719 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 CDK5RAP2Q96SN8 1893 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 FOCADQ5VW36 1801 aa22.72■■□□□ 1.23
CYSTM1-201ENST00000261811 SLC9C2Q5TAH2 1124 aa22.71■■□□□ 1.23
CYSTM1-201ENST00000261811 ERICH6BQ5W0A0 696 aa22.71■■□□□ 1.23
CYSTM1-201ENST00000261811 CDC42EP5Q6NZY7 148 aa22.71■■□□□ 1.23
CYSTM1-201ENST00000261811 STAP2Q9UGK3 403 aa22.71■■□□□ 1.23
CYSTM1-201ENST00000261811 RASA3Q14644 834 aa22.7■■□□□ 1.22
CYSTM1-201ENST00000261811 AOX1Q06278 1338 aa22.7■■□□□ 1.22
CYSTM1-201ENST00000261811 PDE1AP54750 535 aa22.69■■□□□ 1.22
CYSTM1-201ENST00000261811 FKBP1BP68106 108 aa22.69■■□□□ 1.22
CYSTM1-201ENST00000261811 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
CYSTM1-201ENST00000261811 ABT1Q9ULW3 272 aaKnown RBP22.69■■□□□ 1.22
CYSTM1-201ENST00000261811 SCAF8Q9UPN6 1271 aaKnown RBP22.69■■□□□ 1.22
CYSTM1-201ENST00000261811 TSHZ3Q63HK5 1081 aa22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 CENPQQ7L2Z9 268 aaPredicted RBP22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 PI4K2BQ8TCG2 481 aa22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 OTUD7AQ8TE49 926 aaPredicted RBP22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 ZNF384Q8TF68 577 aa22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 GBA2Q9HCG7 927 aaPredicted RBP22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 PAPPA2Q9BXP8 1791 aa22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
CYSTM1-201ENST00000261811 PDE6AP16499 860 aa22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 CACNB3P54284 484 aa22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 PPP4CP60510 307 aa22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 FMR1Q06787 632 aaKnown RBP eCLIP22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 TTLL12Q14166 644 aaPredicted RBP22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 CST9Q5W186 159 aa22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 FAM151AQ8WW52 585 aa22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 IDI2Q9BXS1 227 aa22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 AATFQ9NY61 560 aaKnown RBP eCLIP22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 MYH1P12882 1939 aa22.67■■□□□ 1.22
CYSTM1-201ENST00000261811 PPP1R12BO60237 982 aaPredicted RBP22.66■■□□□ 1.22
CYSTM1-201ENST00000261811 ENTPD3O75355 529 aa22.66■■□□□ 1.22
CYSTM1-201ENST00000261811 KBTBD3Q8NAB2 608 aa22.66■■□□□ 1.22
CYSTM1-201ENST00000261811 EDC3Q96F86 508 aaKnown RBP22.66■■□□□ 1.22
CYSTM1-201ENST00000261811 ZFYP08048 801 aaPredicted RBP22.65■■□□□ 1.22
CYSTM1-201ENST00000261811 PRAMEF18Q5VWM3 479 aa22.65■■□□□ 1.22
CYSTM1-201ENST00000261811 ARMC9Q7Z3E5 817 aa22.65■■□□□ 1.22
CYSTM1-201ENST00000261811 TEX11Q8IYF3 940 aa22.65■■□□□ 1.22
CYSTM1-201ENST00000261811 ZNF532Q9HCE3 1301 aa22.65■■□□□ 1.22
CYSTM1-201ENST00000261811 RPAP1Q9BWH6 1393 aaPredicted RBP22.65■■□□□ 1.22
CYSTM1-201ENST00000261811 MAGEB6P1A0A0J9YX57 407 aa22.64■■□□□ 1.22
CYSTM1-201ENST00000261811 NPM3O75607 178 aaKnown RBP22.64■■□□□ 1.22
CYSTM1-201ENST00000261811 TCP10Q12799 353 aa22.64■■□□□ 1.22
CYSTM1-201ENST00000261811 DLK2Q6UY11 383 aa22.64■■□□□ 1.22
CYSTM1-201ENST00000261811 TMEM39BQ9GZU3 492 aa22.64■■□□□ 1.22
CYSTM1-201ENST00000261811 OSBPL3Q9H4L5 887 aa22.64■■□□□ 1.22
CYSTM1-201ENST00000261811 TLL2Q9Y6L7 1015 aa22.64■■□□□ 1.22
CYSTM1-201ENST00000261811 ADD2P35612 726 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 RGS3P49796 1198 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 RHBDL3P58872 404 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 UBE3CQ15386 1083 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 PLEKHM2Q8IWE5 1019 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 EVI5LQ96CN4 794 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 FSD1Q9BTV5 496 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 CNTNAP1P78357 1384 aa22.63■■□□□ 1.21
CYSTM1-201ENST00000261811 PICALMQ13492 652 aa22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 DEFB115Q30KQ5 88 aa22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 NBPF12Q5TAG4 269 aaPredicted RBP22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 DCAF15Q66K64 600 aa22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 ADGRA1Q86SQ6 560 aa22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 TICAM2Q86XR7 235 aa22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 ZSCAN29Q8IWY8 852 aaPredicted RBP22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 MIGA1Q8NAN2 632 aa22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 SH3RF3Q8TEJ3 882 aaPredicted RBP22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 HHIPL1Q96JK4 782 aa22.62■■□□□ 1.21
CYSTM1-201ENST00000261811 TRIM6-TRIM34B2RNG4 842 aa22.61■■□□□ 1.21
CYSTM1-201ENST00000261811 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
CYSTM1-201ENST00000261811 IREB2P48200 963 aaKnown RBP22.61■■□□□ 1.21
CYSTM1-201ENST00000261811 HUNKP57058 714 aa22.61■■□□□ 1.21
CYSTM1-201ENST00000261811 NFIAQ12857 509 aa22.61■■□□□ 1.21
CYSTM1-201ENST00000261811 SAPCD2Q86UD0 394 aa22.61■■□□□ 1.21
CYSTM1-201ENST00000261811 FAM198AQ9UFP1 575 aa22.61■■□□□ 1.21
CYSTM1-201ENST00000261811 RNF113AO15541 343 aaKnown RBP22.6■■□□□ 1.21
CYSTM1-201ENST00000261811 USP5P45974 858 aa22.6■■□□□ 1.21
CYSTM1-201ENST00000261811 PAXIP1Q6ZW49 1069 aaPredicted RBP22.6■■□□□ 1.21
CYSTM1-201ENST00000261811 TEPSINQ96N21 525 aa22.6■■□□□ 1.21
CYSTM1-201ENST00000261811 CRNKL1Q9BZJ0 848 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms