RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ARHGEF16Q5VV41 709 aa15.35■□□□□ 0.05
PDGFRB-201ENST00000261799 ZNF335Q9H4Z2 1342 aaPredicted RBP15.35■□□□□ 0.05
PDGFRB-201ENST00000261799 BIN1O00499 593 aa15.35■□□□□ 0.05
PDGFRB-201ENST00000261799 AFF2P51816 1311 aa15.35■□□□□ 0.05
PDGFRB-201ENST00000261799 KIF2AO00139 706 aaPredicted RBP15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 GAS8O95995 478 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 CRKLP46109 303 aaKnown RBP15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 HDAC1Q13547 482 aaPredicted RBP15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 USH1GQ495M9 461 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 IL13P35225 146 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 ZKSCAN3Q9BRR0 538 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 EEF2P13639 858 aaKnown RBP15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 ESYT1Q9BSJ8 1104 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 BIRC3Q13489 604 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 SERPINB2P05120 415 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 MAP9Q49MG5 647 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 FMNL3Q8IVF7 1028 aa15.34■□□□□ 0.05
PDGFRB-201ENST00000261799 ARHGEF35A5YM69 484 aa15.33■□□□□ 0.05
PDGFRB-201ENST00000261799 HAUS2Q9NVX0 235 aa15.33■□□□□ 0.05
PDGFRB-201ENST00000261799 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.05
PDGFRB-201ENST00000261799 DDX39AO00148 427 aaKnown RBP15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 DPP9Q86TI2 863 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 ZNF594Q96JF6 807 aaPredicted RBP15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 FSD2A1L4K1 749 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 N4BP3O15049 544 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 ARL1P40616 181 aaPredicted RBP15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 SMC1AQ14683 1233 aaKnown RBP15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 KIF4BQ2VIQ3 1234 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 SV2BQ7L1I2 683 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 INCENPQ9NQS7 918 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 IREB2P48200 963 aaKnown RBP15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 RBM6P78332 1123 aaKnown RBP15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 LETM2Q2VYF4 491 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 C20orf194Q5TEA3 1177 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 KCNG1Q9UIX4 513 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.04
PDGFRB-201ENST00000261799 SYCE3A1L190 88 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 MAP2K1Q02750 393 aaPredicted RBP15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 SPAG1Q07617 926 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 MCF2L2Q86YR7 1114 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 EHBP1Q8NDI1 1231 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 KIAA0232Q92628 1395 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 USP14P54578 494 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 PDE4DQ08499 809 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 C2orf69Q8N8R5 385 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 FAM200AQ8TCP9 573 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 CERKQ8TCT0 537 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 AP5M1Q9H0R1 490 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 GLG1Q92896 1179 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 DHX58Q96C10 678 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 XDHP47989 1333 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
PDGFRB-201ENST00000261799 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 EPB41P11171 864 aaKnown RBP15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 TRPC6Q9Y210 931 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 CCNT1O60563 726 aaKnown RBP15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 GJC1P36383 396 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 KIFAP3Q92845 792 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 MAK16Q9BXY0 300 aaKnown RBP15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 KCTD2Q14681 263 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 NCAPH2Q6IBW4 605 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 NECAB1Q8N987 351 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 PIM2Q9P1W9 311 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 CALUO43852 315 aaPredicted RBP15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 STX10O60499 249 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 CFBP00751 764 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 PROCA1Q8NCQ7 364 aaPredicted RBP15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 DNAJC5Q9H3Z4 198 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 CD2APQ9Y5K6 639 aa15.31■□□□□ 0.04
PDGFRB-201ENST00000261799 KIAA0753Q2KHM9 967 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 DHX32Q7L7V1 743 aaKnown RBP15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 ANKRD35Q8N283 1001 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 APPBP2Q92624 585 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 IBTKQ9P2D0 1353 aaPredicted RBP15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 SCNN1DP51172 638 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 RSPH3Q86UC2 560 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 CRACR2AQ9BSW2 395 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 VAMP4O75379 141 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 LMBR1Q8WVP7 490 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 KRT5P13647 590 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 PLCD1P51178 756 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 AKR1B10O60218 316 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 GSDMDP57764 484 aa15.3■□□□□ 0.04
PDGFRB-201ENST00000261799 CCDC14Q49A88 953 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 RASAL2Q9UJF2 1139 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 MRPL11Q9Y3B7 192 aaKnown RBP15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
PDGFRB-201ENST00000261799 CCDC50Q8IVM0 306 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms