RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZNF174Q15697 407 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 FEZ2Q9UHY8 353 aaPredicted RBP16.02■□□□□ 0.15
CUX2-201ENST00000261726 GRM8O00222 908 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.15
CUX2-201ENST00000261726 C10orf67Q8IYJ2 551 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.15
CUX2-201ENST00000261726 GPR161Q8N6U8 529 aaKnown RBP16.01■□□□□ 0.15
CUX2-201ENST00000261726 RSRC1Q96IZ7 334 aaKnown RBP16.01■□□□□ 0.15
CUX2-201ENST00000261726 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
CUX2-201ENST00000261726 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
CUX2-201ENST00000261726 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 WDR66Q8TBY9 1149 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 KIFAP3Q92845 792 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 TRAF5O00463 557 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 ATP11AP98196 1134 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 NEDD9Q14511 834 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 LETM2Q2VYF4 491 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 CCDC26Q8TAB7 109 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 ZNF526Q8TF50 670 aaPredicted RBP16.01■□□□□ 0.15
CUX2-201ENST00000261726 NSFL1CQ9UNZ2 370 aaKnown RBP16.01■□□□□ 0.15
CUX2-201ENST00000261726 GNA11P29992 359 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 FMNL3Q8IVF7 1028 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 TBC1D31Q96DN5 1066 aa16.01■□□□□ 0.15
CUX2-201ENST00000261726 TNFAIP3P21580 790 aa16■□□□□ 0.15
CUX2-201ENST00000261726 IL15P40933 162 aaPredicted RBP16■□□□□ 0.15
CUX2-201ENST00000261726 ITIH3Q06033 890 aa16■□□□□ 0.15
CUX2-201ENST00000261726 FYB2Q5VWT5 728 aa16■□□□□ 0.15
CUX2-201ENST00000261726 GTF3C6Q969F1 213 aa16■□□□□ 0.15
CUX2-201ENST00000261726 GPCPD1Q9NPB8 672 aa16■□□□□ 0.15
CUX2-201ENST00000261726 FAM184BQ9ULE4 1060 aa16■□□□□ 0.15
CUX2-201ENST00000261726 KIF3CO14782 793 aa16■□□□□ 0.15
CUX2-201ENST00000261726 SV2BQ7L1I2 683 aa16■□□□□ 0.15
CUX2-201ENST00000261726 NOC4LQ9BVI4 516 aaKnown RBP16■□□□□ 0.15
CUX2-201ENST00000261726 ABCC2Q92887 1545 aa16■□□□□ 0.15
CUX2-201ENST00000261726 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
CUX2-201ENST00000261726 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
CUX2-201ENST00000261726 NOD1Q9Y239 953 aa16■□□□□ 0.15
CUX2-201ENST00000261726 PTPDC1A2A3K4 754 aa16■□□□□ 0.15
CUX2-201ENST00000261726 PARP1P09874 1014 aaKnown RBP16■□□□□ 0.15
CUX2-201ENST00000261726 RPL13P26373 211 aaKnown RBP16■□□□□ 0.15
CUX2-201ENST00000261726 SLC8A3P57103 927 aa16■□□□□ 0.15
CUX2-201ENST00000261726 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
CUX2-201ENST00000261726 GINS2Q9Y248 185 aa16■□□□□ 0.15
CUX2-201ENST00000261726 ARFGAP2Q8N6H7 521 aa16■□□□□ 0.15
CUX2-201ENST00000261726 AFG3L2Q9Y4W6 797 aa16■□□□□ 0.15
CUX2-201ENST00000261726 RNF113AO15541 343 aaKnown RBP15.99■□□□□ 0.15
CUX2-201ENST00000261726 GNAT2P19087 354 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 ZNF131P52739 623 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 CUL4BQ13620 913 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 MAEAQ7L5Y9 396 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 ATP5DP30049 168 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 SDCCAG8Q86SQ7 713 aaPredicted RBP15.99■□□□□ 0.15
CUX2-201ENST00000261726 SARNPP82979 210 aaKnown RBP15.99■□□□□ 0.15
CUX2-201ENST00000261726 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
CUX2-201ENST00000261726 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
CUX2-201ENST00000261726 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 LDHBP07195 334 aaKnown RBP15.99■□□□□ 0.15
CUX2-201ENST00000261726 AK2P54819 239 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 BIRC2Q13490 618 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 JDP2Q8WYK2 163 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 HDXQ7Z353 690 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 NYXQ9GZU5 481 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 RABEP2Q9H5N1 569 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 PARP3Q9Y6F1 533 aa15.99■□□□□ 0.15
CUX2-201ENST00000261726 GPIHBP1Q8IV16 184 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 TRIM31Q9BZY9 425 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 PLCH2O75038 1416 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 AKR1B15C9JRZ8 316 aaPredicted RBP15.98■□□□□ 0.15
CUX2-201ENST00000261726 SF3A3Q12874 501 aaKnown RBP eCLIP15.98■□□□□ 0.15
CUX2-201ENST00000261726 FCHSD1Q86WN1 690 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 CSRNP2Q9H175 543 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 ACEP12821 1306 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 FAM170AA1A519 330 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 EIF6P56537 245 aaKnown RBP15.98■□□□□ 0.15
CUX2-201ENST00000261726 TRPC3Q13507 836 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 GBP6Q6ZN66 633 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 BAG1Q99933 345 aaPredicted RBP15.98■□□□□ 0.15
CUX2-201ENST00000261726 GJA3Q9Y6H8 435 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 GIPC1O14908 333 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 UBE2Q2Q8WVN8 375 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 CASQ2O14958 399 aaPredicted RBP15.98■□□□□ 0.15
CUX2-201ENST00000261726 PCK1P35558 622 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 ERCC6LQ2NKX8 1250 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 CCDC170Q8IYT3 715 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 PRPF31Q8WWY3 499 aaKnown RBP15.98■□□□□ 0.15
CUX2-201ENST00000261726 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 VPS16Q9H269 839 aa15.98■□□□□ 0.15
CUX2-201ENST00000261726 PPP2R3AQ06190 1150 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 IQUBQ8NA54 791 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 PLCG2P16885 1265 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 C8orf37Q96NL8 207 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 USTQ9Y2C2 406 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 UTP11Q9Y3A2 253 aaKnown RBP15.97■□□□□ 0.15
CUX2-201ENST00000261726 A0A1B0GVL5 298 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 CREB3L3Q68CJ9 461 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 ARHGEF2Q92974 986 aaKnown RBP15.97■□□□□ 0.15
CUX2-201ENST00000261726 TRIM6Q9C030 488 aaPredicted RBP15.97■□□□□ 0.15
CUX2-201ENST00000261726 MAPK8IP1Q9UQF2 711 aa15.97■□□□□ 0.15
CUX2-201ENST00000261726 TTLL3Q9Y4R7 772 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms