RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 MYO5AQ9Y4I1 1855 aaKnown RBP22.35■■□□□ 1.17
SCARB1-201ENST00000261693 KCPQ6ZWJ8 1503 aa22.35■■□□□ 1.17
SCARB1-201ENST00000261693 ERVV-2B6SEH9 535 aa22.34■■□□□ 1.17
SCARB1-201ENST00000261693 HSP90AA4PQ58FG1 418 aa22.34■■□□□ 1.17
SCARB1-201ENST00000261693 KRT222Q8N1A0 295 aa22.34■■□□□ 1.17
SCARB1-201ENST00000261693 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.34■■□□□ 1.171e-8■■■■□ 21.3
SCARB1-201ENST00000261693 IKBKBO14920 756 aa22.34■■□□□ 1.17
SCARB1-201ENST00000261693 NRDCO43847 1150 aa22.34■■□□□ 1.17
SCARB1-201ENST00000261693 CFAP100Q494V2 611 aa22.34■■□□□ 1.17
SCARB1-201ENST00000261693 L2HGDHQ9H9P8 463 aa22.34■■□□□ 1.17
SCARB1-201ENST00000261693 DDX60Q8IY21 1712 aaKnown RBP22.33■■□□□ 1.17
SCARB1-201ENST00000261693 PTPAQ15257 358 aa22.33■■□□□ 1.17
SCARB1-201ENST00000261693 SPECC1Q5M775 1068 aa22.33■■□□□ 1.17
SCARB1-201ENST00000261693 APOA5Q6Q788 366 aa22.33■■□□□ 1.17
SCARB1-201ENST00000261693 ZNF446Q9NWS9 450 aa22.33■■□□□ 1.17
SCARB1-201ENST00000261693 SH2B2O14492 632 aaPredicted RBP22.33■■□□□ 1.16
SCARB1-201ENST00000261693 GPTP24298 496 aa22.33■■□□□ 1.16
SCARB1-201ENST00000261693 ADD2P35612 726 aa22.33■■□□□ 1.16
SCARB1-201ENST00000261693 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.16
SCARB1-201ENST00000261693 NFXL1Q6ZNB6 911 aa22.33■■□□□ 1.16
SCARB1-201ENST00000261693 DNAI1Q9UI46 699 aa22.33■■□□□ 1.16
SCARB1-201ENST00000261693 TUBE1Q9UJT0 475 aa22.33■■□□□ 1.16
SCARB1-201ENST00000261693 HPSEQ9Y251 543 aa22.33■■□□□ 1.16
SCARB1-201ENST00000261693 TMEM232C9JQI7 657 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 MYL5Q02045 173 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 LONRF3Q496Y0 759 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 PIH1D3Q9NQM4 214 aaKnown RBP22.32■■□□□ 1.16
SCARB1-201ENST00000261693 UBR2Q8IWV8 1755 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 TNS3Q68CZ2 1445 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 TIGD1Q96MW7 591 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 MAP3K14Q99558 947 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 ST7Q9NRC1 585 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 AKAP11Q9UKA4 1901 aa22.32■■□□□ 1.16
SCARB1-201ENST00000261693 CCDC93Q567U6 631 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 METTL16Q86W50 562 aaKnown RBP22.31■■□□□ 1.16
SCARB1-201ENST00000261693 GREM2Q9H772 168 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 FANCLQ9NW38 375 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 WDR19Q8NEZ3 1342 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 FOXN1O15353 648 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 PCCAP05165 728 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-201ENST00000261693 ITGA6P23229 1130 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 GABPB1Q06547 395 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-201ENST00000261693 FOXP4Q8IVH2 680 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-201ENST00000261693 JMYQ8N9B5 988 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
SCARB1-201ENST00000261693 PARP4Q9UKK3 1724 aaKnown RBP22.31■■□□□ 1.16
SCARB1-201ENST00000261693 RIC1Q4ADV7 1423 aa22.31■■□□□ 1.16
SCARB1-201ENST00000261693 RANBP6O60518 1105 aaKnown RBP22.3■■□□□ 1.16
SCARB1-201ENST00000261693 PPP6R2O75170 966 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 CDKL5O76039 1030 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 SLFN14P0C7P3 912 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 PRDM11Q9NQV5 511 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 FBXO3Q9UK99 471 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 RIPOR2Q9Y4F9 1068 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.3■■□□□ 1.161e-6■■■□□ 17.3
SCARB1-201ENST00000261693 ZNF532Q9HCE3 1301 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 ZBTB43O43298 467 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 CSF1RP07333 972 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 IARSP41252 1262 aaKnown RBP22.3■■□□□ 1.16
SCARB1-201ENST00000261693 RESP18Q5W5W9 173 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 ZBTB38Q8NAP3 1195 aaPredicted RBP22.3■■□□□ 1.16
SCARB1-201ENST00000261693 CNNM1Q9NRU3 951 aa22.3■■□□□ 1.16
SCARB1-201ENST00000261693 CPLX2Q6PUV4 134 aaKnown RBP22.29■■□□□ 1.16
SCARB1-201ENST00000261693 CNNM3Q8NE01 707 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 SPATA31A3Q5VYP0 1347 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 ETF1P62495 437 aaKnown RBP22.29■■□□□ 1.16
SCARB1-201ENST00000261693 TRIM29Q14134 588 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 OLFM4Q6UX06 510 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 KIF6Q6ZMV9 814 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 KCNH3Q9ULD8 1083 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 WWC3Q9ULE0 1092 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 PCDHA5Q9Y5H7 936 aa22.29■■□□□ 1.16
SCARB1-201ENST00000261693 UBN2Q6ZU65 1347 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 GOLGA8AA7E2F4 631 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 KCNJ6P48051 423 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 PDE4BQ07343 736 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 FAM177A1Q8N128 213 aaPredicted RBP22.28■■□□□ 1.16
SCARB1-201ENST00000261693 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.28■■□□□ 1.16
SCARB1-201ENST00000261693 SLC26A6Q9BXS9 759 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 NTRK3Q16288 839 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 ARHGAP29Q52LW3 1261 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 TMEM67Q5HYA8 995 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 STK11IPQ8N1F8 1099 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 IGDCC4Q8TDY8 1250 aa22.28■■□□□ 1.16
SCARB1-201ENST00000261693 FANCGO15287 622 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 TOP1P11387 765 aaKnown RBP22.27■■□□□ 1.16
SCARB1-201ENST00000261693 BMP6P22004 513 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 HLFQ16534 295 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 CCDC102BQ68D86 513 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 DNAJC10Q8IXB1 793 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 LY9Q9HBG7 655 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 FAM217BQ9NTX9 383 aaPredicted RBP22.27■■□□□ 1.16
SCARB1-201ENST00000261693 PLEKHG2Q9H7P9 1386 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 CBFA2T2O43439 604 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 PHKA1P46020 1223 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 CTDSPL2Q05D32 466 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 KRBA2Q6ZNG9 492 aa22.27■■□□□ 1.16
SCARB1-201ENST00000261693 VSTM4Q8IW00 320 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms