RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 FBXO18Q8NFZ0 1043 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 CGNQ9P2M7 1197 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 KIF28PB7ZC32 967 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 SERPINC1P01008 464 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 CDC25BP30305 580 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 TPM4P67936 248 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 RTEL1Q9NZ71 1219 aa16.76■□□□□ 0.27
SFSWAP-201ENST00000261674 INCENPQ9NQS7 918 aa16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 TRMT112Q9UI30 125 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 PARP4Q9UKK3 1724 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 NCOA7Q8NI08 942 aa16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 NRDCO43847 1150 aa16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 FAM196AQ6ZSG2 479 aa16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 OGFRQ9NZT2 677 aa16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 N4BP2Q86UW6 1770 aaPredicted RBP16.75■□□□□ 0.27
SFSWAP-201ENST00000261674 GPAA1O43292 621 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 PFKFB1P16118 471 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 GTF2E1P29083 439 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 ANO1Q5XXA6 986 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 CLIC6Q96NY7 704 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 METTL24Q5JXM2 366 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 NBPF11Q86T75 865 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 ALG1Q9BT22 464 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 SYKP43405 635 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 RBM6P78332 1123 aaKnown RBP16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 ERCC6LQ2NKX8 1250 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 SLC9C2Q5TAH2 1124 aa16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 NIP7Q9Y221 180 aaKnown RBP eCLIP16.74■□□□□ 0.27
SFSWAP-201ENST00000261674 GSDMDP57764 484 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 PDILTQ8N807 584 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 FEZ1Q99689 392 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 WWC3Q9ULE0 1092 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 UBE2Q2LH0YL09 131 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 LRRFIP1Q32MZ4 808 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 ATL3Q6DD88 541 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 LDHAL6AQ6ZMR3 332 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 HELBQ8NG08 1087 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 C5P01031 1676 aa16.73■□□□□ 0.27
SFSWAP-201ENST00000261674 PKD1L3Q7Z443 1732 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 B4E1Z4 1266 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 WDHD1O75717 1129 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 IFIT5Q13325 482 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 PNOCQ13519 176 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 AGXT2Q9BYV1 514 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 ABCC6O95255 1503 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 SLU7O95391 586 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 ZBTB9Q96C00 473 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 SALL1Q9NSC2 1324 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 UBASH3AP57075 661 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 FANCCQ00597 558 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 E4F1Q66K89 784 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 FBXO38Q6PIJ6 1188 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 KCPQ6ZWJ8 1503 aa16.72■□□□□ 0.27
SFSWAP-201ENST00000261674 ANTXR2P58335 489 aa16.71■□□□□ 0.27
SFSWAP-201ENST00000261674 NYAP1Q6ZVC0 841 aa16.71■□□□□ 0.27
SFSWAP-201ENST00000261674 CHMP4CQ96CF2 233 aa16.71■□□□□ 0.27
SFSWAP-201ENST00000261674 TCIRG1Q13488 830 aa16.71■□□□□ 0.27
SFSWAP-201ENST00000261674 LRRN4CLQ8ND94 238 aa16.71■□□□□ 0.27
SFSWAP-201ENST00000261674 SNAP23O00161 211 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 NKX2-3Q8TAU0 364 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 SHANK3Q9BYB0 1731 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 NLRP12P59046 1061 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 KIF23Q02241 960 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 MSL1Q68DK7 614 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 APPBP2Q92624 585 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 SMARCC1Q92922 1105 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 PPP1R13BQ96KQ4 1090 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 GLI3P10071 1580 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 A0A1W2PQ27 194 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 A0A1W2PQ64 194 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 URI1O94763 535 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 TRIM29Q14134 588 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 DPF2Q92785 391 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 AK7Q96M32 723 aa16.7■□□□□ 0.26
SFSWAP-201ENST00000261674 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 FOXP2O15409 715 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms