RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CCDC171Q6TFL3 1326 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 ZNF532Q9HCE3 1301 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 LRSAM1Q6UWE0 723 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 OSBP2Q969R2 916 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 TCRBV5S4A2TA0A5A2 114 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 NUCB2P80303 420 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 DALRD3Q5D0E6 543 aaKnown RBP22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 MAGEB6Q8N7X4 407 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 PIBF1Q8WXW3 757 aa22.28■■□□□ 1.16
COL4A3BP-201ENST00000261415 SALL1Q9NSC2 1324 aa22.27■■□□□ 1.16
COL4A3BP-201ENST00000261415 M0R2C6 588 aa22.27■■□□□ 1.16
COL4A3BP-201ENST00000261415 PTH1RQ03431 593 aa22.27■■□□□ 1.16
COL4A3BP-201ENST00000261415 RTKN2Q8IZC4 609 aa22.27■■□□□ 1.16
COL4A3BP-201ENST00000261415 WDR66Q8TBY9 1149 aa22.27■■□□□ 1.16
COL4A3BP-201ENST00000261415 OGFRQ9NZT2 677 aa22.27■■□□□ 1.16
COL4A3BP-201ENST00000261415 IRX5P78411 483 aaPredicted RBP22.26■■□□□ 1.15
COL4A3BP-201ENST00000261415 SUPT20HQ8NEM7 779 aa22.26■■□□□ 1.15
COL4A3BP-201ENST00000261415 PUS7LQ9H0K6 701 aaKnown RBP22.26■■□□□ 1.15
COL4A3BP-201ENST00000261415 LMBRD1Q9NUN5 540 aa22.26■■□□□ 1.15
COL4A3BP-201ENST00000261415 RAI14Q9P0K7 980 aa22.26■■□□□ 1.15
COL4A3BP-201ENST00000261415 SOGA3Q5TF21 947 aa22.26■■□□□ 1.15
COL4A3BP-201ENST00000261415 DOK7Q18PE1 504 aa22.25■■□□□ 1.15
COL4A3BP-201ENST00000261415 ZGPATQ8N5A5 531 aaKnown RBP22.25■■□□□ 1.15
COL4A3BP-201ENST00000261415 NLGN2Q8NFZ4 835 aa22.25■■□□□ 1.15
COL4A3BP-201ENST00000261415 SPDYE4A6NLX3 237 aa22.24■■□□□ 1.15
COL4A3BP-201ENST00000261415 PRDX5P30044 214 aa22.24■■□□□ 1.15
COL4A3BP-201ENST00000261415 MCTP1Q6DN14 999 aa22.24■■□□□ 1.15
COL4A3BP-201ENST00000261415 PSMD1Q99460 953 aa22.24■■□□□ 1.15
COL4A3BP-201ENST00000261415 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
COL4A3BP-201ENST00000261415 NOLC1Q14978 699 aaKnown RBP eCLIP22.24■■□□□ 1.15
COL4A3BP-201ENST00000261415 FAM205AQ6ZU69 1335 aa22.24■■□□□ 1.15
COL4A3BP-201ENST00000261415 G3V3G9 751 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 MCCP23508 829 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 AOC3Q16853 763 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 DCAF8Q5TAQ9 597 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 TEX2Q8IWB9 1127 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 MAP4K1Q92918 833 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 KIF2CQ99661 725 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 DBNDD1Q9H9R9 158 aa22.23■■□□□ 1.15
COL4A3BP-201ENST00000261415 LAMA4Q16363 1823 aa22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 CDK5RAP2Q96SN8 1893 aa22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 GPAA1O43292 621 aa22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 HSPA4P34932 840 aa22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 SPTY2D1Q68D10 685 aaPredicted RBP22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 ZNF384Q8TF68 577 aa22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 ANKRD7Q92527 254 aa22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 NSUN4Q96CB9 384 aaKnown RBP22.22■■□□□ 1.15
COL4A3BP-201ENST00000261415 GTF2IP78347 998 aa22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 MECOMQ03112 1051 aa22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 VPS53Q5VIR6 699 aa22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 NAA16Q6N069 864 aaPredicted RBP22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 PODNQ7Z5L7 613 aa22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 ADGRA1Q86SQ6 560 aa22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 TSC1Q92574 1164 aa22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 BCS1LQ9Y276 419 aa22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 RBM8AQ9Y5S9 174 aaKnown RBP22.21■■□□□ 1.15
COL4A3BP-201ENST00000261415 PPIP5K2O43314 1243 aa22.2■■□□□ 1.15
COL4A3BP-201ENST00000261415 ECE2O60344 883 aa22.2■■□□□ 1.15
COL4A3BP-201ENST00000261415 LDHBP07195 334 aaKnown RBP22.2■■□□□ 1.15
COL4A3BP-201ENST00000261415 CYP7A1P22680 504 aa22.2■■□□□ 1.15
COL4A3BP-201ENST00000261415 IRX3P78415 501 aaPredicted RBP22.2■■□□□ 1.15
COL4A3BP-201ENST00000261415 TBC1D22AQ8WUA7 517 aa22.2■■□□□ 1.15
COL4A3BP-201ENST00000261415 PALD1Q9ULE6 856 aa22.2■■□□□ 1.15
COL4A3BP-201ENST00000261415 COL4A5P29400 1685 aa22.2■■□□□ 1.14
COL4A3BP-201ENST00000261415 MFSD14BQ5SR56 506 aa22.2■■□□□ 1.14
COL4A3BP-201ENST00000261415 FHDC1Q9C0D6 1143 aaPredicted RBP22.2■■□□□ 1.14
COL4A3BP-201ENST00000261415 BAZ2AQ9UIF9 1905 aaKnown RBP22.2■■□□□ 1.14
COL4A3BP-201ENST00000261415 HSPD1P10809 573 aaKnown RBP22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 GRIK5Q16478 980 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 DZIP1Q86YF9 867 aaKnown RBP22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 AIDAQ96BJ3 306 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 TIGD1Q96MW7 591 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 DSCC1Q9BVC3 393 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 TSPYL1Q9H0U9 437 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 IGSF3O75054 1194 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 NECTIN1Q15223 517 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 FOXD4L1Q9NU39 408 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 SPTLC3Q9NUV7 552 aa22.19■■□□□ 1.14
COL4A3BP-201ENST00000261415 MBD4O95243 580 aa22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 TTLL5Q6EMB2 1281 aa22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 TMED8Q6PL24 325 aaPredicted RBP22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 FBXW7Q969H0 707 aa22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 ZNF277Q9NRM2 450 aaPredicted RBP22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 ADAMTSL1Q8N6G6 1762 aa22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 SRCAPQ6ZRS2 3230 aa22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 CHRM1P11229 460 aaPredicted RBP22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 ANAPC15P60006 121 aa22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 MIGA1Q8NAN2 632 aa22.18■■□□□ 1.14
COL4A3BP-201ENST00000261415 FOXP2O15409 715 aa22.17■■□□□ 1.14
COL4A3BP-201ENST00000261415 U2AF2P26368 475 aaKnown RBP eCLIP22.17■■□□□ 1.142e-8■■■■■ 27.8
COL4A3BP-201ENST00000261415 STRBPQ96SI9 672 aaKnown RBP22.17■■□□□ 1.14
COL4A3BP-201ENST00000261415 VPS33BQ9H267 617 aa22.17■■□□□ 1.14
COL4A3BP-201ENST00000261415 ARMT1Q9H993 441 aa22.17■■□□□ 1.14
COL4A3BP-201ENST00000261415 KCNQ5Q9NR82 932 aa22.17■■□□□ 1.14
COL4A3BP-201ENST00000261415 U3KPZ7 1027 aaPredicted RBP22.17■■□□□ 1.14
COL4A3BP-201ENST00000261415 LCORLQ8N3X6 602 aa22.16■■□□□ 1.14
COL4A3BP-201ENST00000261415 TAOK3Q9H2K8 898 aa22.16■■□□□ 1.14
COL4A3BP-201ENST00000261415 DICER1Q9UPY3 1922 aaKnown RBP22.16■■□□□ 1.14
COL4A3BP-201ENST00000261415 CREB3L3Q68CJ9 461 aa22.15■■□□□ 1.14
COL4A3BP-201ENST00000261415 RASEFQ8IZ41 740 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms