RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 AATFQ9NY61 560 aaKnown RBP eCLIP19.88■□□□□ 0.77
HLA-F-216ENST00000259951 PSME4Q14997 1843 aa19.88■□□□□ 0.77
HLA-F-216ENST00000259951 E7EWF7 191 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 PLCG2P16885 1265 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 PPP4CP60510 307 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 DYNLL1P63167 89 aaKnown RBP19.87■□□□□ 0.77
HLA-F-216ENST00000259951 FER1L6Q2WGJ9 1857 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 USP17L3A6NCW0 530 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 USP17L4A6NCW7 530 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 PRKAB2O43741 272 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 GRIK5Q16478 980 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 USP17L1Q7RTZ2 530 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 EPB41L4AQ9HCS5 686 aaPredicted RBP19.87■□□□□ 0.77
HLA-F-216ENST00000259951 ATP8A2Q9NTI2 1148 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 TAF6LQ9Y6J9 622 aa19.87■□□□□ 0.77
HLA-F-216ENST00000259951 SCN9AQ15858 1988 aa19.86■□□□□ 0.77
HLA-F-216ENST00000259951 ARFGEF1Q9Y6D6 1849 aa19.86■□□□□ 0.77
HLA-F-216ENST00000259951 HAND2P61296 217 aa19.86■□□□□ 0.77
HLA-F-216ENST00000259951 TRDNQ13061 729 aa19.86■□□□□ 0.77
HLA-F-216ENST00000259951 AK2P54819 239 aa19.85■□□□□ 0.77
HLA-F-216ENST00000259951 DIXDC1Q155Q3 683 aa19.85■□□□□ 0.77
HLA-F-216ENST00000259951 STOX1Q6ZVD7 989 aa19.85■□□□□ 0.77
HLA-F-216ENST00000259951 DHX32Q7L7V1 743 aaKnown RBP19.85■□□□□ 0.77
HLA-F-216ENST00000259951 LARGE2Q8N3Y3 721 aa19.85■□□□□ 0.77
HLA-F-216ENST00000259951 LIMCH1Q9UPQ0 1083 aa19.85■□□□□ 0.77
HLA-F-216ENST00000259951 BAZ2AQ9UIF9 1905 aaKnown RBP19.85■□□□□ 0.77
HLA-F-216ENST00000259951 ZNF646O15015 1829 aaPredicted RBP19.84■□□□□ 0.77
HLA-F-216ENST00000259951 GPR75-ASB3A0A0A6YYF3 556 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 CPA1P15085 419 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 RALYLQ86SE5 291 aaKnown RBP19.84■□□□□ 0.77
HLA-F-216ENST00000259951 NCOA7Q8NI08 942 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 SDR42E1Q8WUS8 393 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 ZSCAN31Q96LW9 406 aaPredicted RBP19.84■□□□□ 0.77
HLA-F-216ENST00000259951 GAKO14976 1311 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 TIAM2Q8IVF5 1701 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 CERS5Q8N5B7 392 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 TMX3Q96JJ7 454 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 FHDC1Q9C0D6 1143 aaPredicted RBP19.84■□□□□ 0.77
HLA-F-216ENST00000259951 TAOK3Q9H2K8 898 aa19.84■□□□□ 0.77
HLA-F-216ENST00000259951 TTF2Q9UNY4 1162 aaKnown RBP19.84■□□□□ 0.77
HLA-F-216ENST00000259951 BTDP43251 543 aa19.83■□□□□ 0.76
HLA-F-216ENST00000259951 DACT2Q5SW24 774 aa19.83■□□□□ 0.76
HLA-F-216ENST00000259951 SYT17Q9BSW7 474 aa19.83■□□□□ 0.76
HLA-F-216ENST00000259951 MRIQ9BWK5 157 aa19.83■□□□□ 0.76
HLA-F-216ENST00000259951 RNF41Q9H4P4 317 aaPredicted RBP19.83■□□□□ 0.76
HLA-F-216ENST00000259951 CNNM2Q9H8M5 875 aa19.83■□□□□ 0.76
HLA-F-216ENST00000259951 ZNF277Q9NRM2 450 aaPredicted RBP19.83■□□□□ 0.76
HLA-F-216ENST00000259951 BCS1LQ9Y276 419 aa19.83■□□□□ 0.76
HLA-F-216ENST00000259951 LAMB1P07942 1786 aa19.82■□□□□ 0.76
HLA-F-216ENST00000259951 IARSP41252 1262 aaKnown RBP19.82■□□□□ 0.76
HLA-F-216ENST00000259951 NIM1KQ8IY84 436 aa19.82■□□□□ 0.76
HLA-F-216ENST00000259951 SH2B1Q9NRF2 756 aaPredicted RBP19.82■□□□□ 0.76
HLA-F-216ENST00000259951 ANAPC4Q9UJX5 808 aa19.82■□□□□ 0.76
HLA-F-216ENST00000259951 MYO3BQ8WXR4 1341 aa19.82■□□□□ 0.76
HLA-F-216ENST00000259951 CDK5RAP2Q96SN8 1893 aa19.82■□□□□ 0.76
HLA-F-216ENST00000259951 MCM5P33992 734 aa19.81■□□□□ 0.76
HLA-F-216ENST00000259951 USP5P45974 858 aa19.81■□□□□ 0.76
HLA-F-216ENST00000259951 FGD1P98174 961 aa19.81■□□□□ 0.76
HLA-F-216ENST00000259951 HDLBPQ00341 1268 aaKnown RBP19.81■□□□□ 0.76
HLA-F-216ENST00000259951 HHIPL2Q6UWX4 724 aa19.81■□□□□ 0.76
HLA-F-216ENST00000259951 NOL8Q76FK4 1167 aaKnown RBP19.81■□□□□ 0.76
HLA-F-216ENST00000259951 SPRYD3Q8NCJ5 442 aa19.81■□□□□ 0.76
HLA-F-216ENST00000259951 TEKT1Q969V4 418 aa19.81■□□□□ 0.76
HLA-F-216ENST00000259951 DCP1AQ9NPI6 582 aaPredicted RBP19.81■□□□□ 0.76
HLA-F-216ENST00000259951 ARPP21Q9UBL0 812 aaPredicted RBP19.81■□□□□ 0.76
HLA-F-216ENST00000259951 WDR19Q8NEZ3 1342 aa19.81■□□□□ 0.76
HLA-F-216ENST00000259951 NAV1Q8NEY1 1877 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 LTBP3Q9NS15 1303 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 PCP11498 1178 aaKnown RBP19.8■□□□□ 0.76
HLA-F-216ENST00000259951 EXOSC10Q01780 885 aaKnown RBP19.8■□□□□ 0.76
HLA-F-216ENST00000259951 PPARAQ07869 468 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 AKNAD1Q5T1N1 836 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 MFSD6Q6ZSS7 791 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 AMOTL1Q8IY63 956 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 SH3RF3Q8TEJ3 882 aaPredicted RBP19.8■□□□□ 0.76
HLA-F-216ENST00000259951 STAG1Q8WVM7 1258 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 KRT23Q9C075 422 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 NBPF3Q9H094 633 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 KCNQ5Q9NR82 932 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 F8W031 263 aaPredicted RBP19.8■□□□□ 0.76
HLA-F-216ENST00000259951 SLC3A2P08195 630 aaKnown RBP19.8■□□□□ 0.76
HLA-F-216ENST00000259951 CUL4AQ13619 759 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 SBK1Q52WX2 424 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 TBC1D10CQ8IV04 446 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
HLA-F-216ENST00000259951 SLKQ9H2G2 1235 aaPredicted RBP19.8■□□□□ 0.76
HLA-F-216ENST00000259951 ZNRF3Q9ULT6 936 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 DAGLAQ9Y4D2 1042 aa19.8■□□□□ 0.76
HLA-F-216ENST00000259951 FOCADQ5VW36 1801 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 YDJCA8MPS7 323 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 MINDY4BA8MYZ0 360 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 Q6ZUG5 572 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 MB21D2Q8IYB1 491 aaPredicted RBP19.79■□□□□ 0.76
HLA-F-216ENST00000259951 TEX11Q8IYF3 940 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 FBXL16Q8N461 479 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 JDP2Q8WYK2 163 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 MXD3Q9BW11 206 aa19.79■□□□□ 0.76
HLA-F-216ENST00000259951 CWC22Q9HCG8 908 aaKnown RBP19.79■□□□□ 0.76
HLA-F-216ENST00000259951 GOLGB1Q14789 3259 aaKnown RBP19.78■□□□□ 0.76
HLA-F-216ENST00000259951 CTR9Q6PD62 1173 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms