RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 CKAP2LQ8IYA6 745 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 LY9Q9HBG7 655 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 GSG1L2A8MUP6 293 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 PRKAB2O43741 272 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 TM4SF1P30408 202 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 TYRO3Q06418 890 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 EARS2Q5JPH6 523 aaKnown RBP10.76□□□□□ -0.69
RPA1-201ENST00000254719 SASS6Q6UVJ0 657 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 CPLX1O14810 134 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 GPAA1O43292 621 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 PCDHA7Q9UN72 937 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 DHX16O60231 1041 aaKnown RBP10.75□□□□□ -0.69
RPA1-201ENST00000254719 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
RPA1-201ENST00000254719 TRIM29Q14134 588 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 BICD2Q8TD16 824 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 RTL9Q8NET4 1388 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 GREB1LQ9C091 1923 aaPredicted RBP10.75□□□□□ -0.69
RPA1-201ENST00000254719 IFIT1P09914 478 aaKnown RBP10.75□□□□□ -0.69
RPA1-201ENST00000254719 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
RPA1-201ENST00000254719 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 HPSEQ9Y251 543 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 SLC35G1Q2M3R5 365 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 LINC00301Q8NCQ3 95 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 NEUROD6Q96NK8 337 aa10.75□□□□□ -0.69
RPA1-201ENST00000254719 USP27XA6NNY8 438 aa10.74□□□□□ -0.69
RPA1-201ENST00000254719 NOM1Q5C9Z4 860 aaKnown RBP10.74□□□□□ -0.69
RPA1-201ENST00000254719 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
RPA1-201ENST00000254719 LLPHQ9BRT6 129 aaKnown RBP10.74□□□□□ -0.69
RPA1-201ENST00000254719 NAA16Q6N069 864 aaPredicted RBP10.74□□□□□ -0.69
RPA1-201ENST00000254719 LINC00116Q8NCU8 138 aa10.74□□□□□ -0.69
RPA1-201ENST00000254719 TDRD7Q8NHU6 1098 aaKnown RBP10.74□□□□□ -0.69
RPA1-201ENST00000254719 FAM237AA0A1B0GTK4 181 aa10.74□□□□□ -0.69
RPA1-201ENST00000254719 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPA1-201ENST00000254719 RALYLQ86SE5 291 aaKnown RBP10.74□□□□□ -0.69
RPA1-201ENST00000254719 TMOD3Q9NYL9 352 aa10.74□□□□□ -0.69
RPA1-201ENST00000254719 ERVV-1B6SEH8 477 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 NDUFA8P51970 172 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 UVSSAQ2YD98 709 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 NAT10Q9H0A0 1025 aaKnown RBP10.73□□□□□ -0.69
RPA1-201ENST00000254719 INTS13Q9NVM9 706 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 SPATA31A5Q5VU36 1347 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 SPATA31A7Q8IWB4 1347 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 SH2B2O14492 632 aaPredicted RBP10.73□□□□□ -0.69
RPA1-201ENST00000254719 KRT85P78386 507 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 HMGN5P82970 282 aaKnown RBP10.73□□□□□ -0.69
RPA1-201ENST00000254719 AKAP17AQ02040 695 aaKnown RBP10.73□□□□□ -0.69
RPA1-201ENST00000254719 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 BAZ2BQ9UIF8 2168 aaKnown RBP10.73□□□□□ -0.69
RPA1-201ENST00000254719 GUCY1B3Q02153 619 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 ANO6Q4KMQ2 910 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 SHC4Q6S5L8 630 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 APPBP2Q92624 585 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 ZNF396Q96N95 335 aaPredicted RBP10.73□□□□□ -0.69
RPA1-201ENST00000254719 ZNF532Q9HCE3 1301 aa10.73□□□□□ -0.69
RPA1-201ENST00000254719 IL6STP40189 918 aaPredicted RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 RIOK1Q9BRS2 568 aaKnown RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 CEP350Q5VT06 3117 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 IRS4O14654 1257 aaPredicted RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 PDE6AP16499 860 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 RXRAP19793 462 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 CRKLP46109 303 aaKnown RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 FKBP4Q02790 459 aaKnown RBP eCLIP10.72□□□□□ -0.69
RPA1-201ENST00000254719 FBXO18Q8NFZ0 1043 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 ZMYM6O95789 1325 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 KIF23Q02241 960 aaPredicted RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 NAA30Q147X3 362 aaPredicted RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 CACTINQ8WUQ7 758 aaKnown RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
RPA1-201ENST00000254719 ARFGEF1Q9Y6D6 1849 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 STK11IPQ8N1F8 1099 aa10.72□□□□□ -0.69
RPA1-201ENST00000254719 NAV1Q8NEY1 1877 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 A0A087X0B3 334 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 BCAMP50895 628 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 SEC23AQ15436 765 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 TXNRD3Q86VQ6 643 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 LCORLQ8N3X6 602 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 RTEL1Q9NZ71 1219 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 CTNNA3Q9UI47 895 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 CCDC192P0DO97 292 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 PKN1Q16512 942 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 LRRC15Q8TF66 581 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 DNAJC25Q9H1X3 360 aa10.71□□□□□ -0.69
RPA1-201ENST00000254719 WDR19Q8NEZ3 1342 aa10.71□□□□□ -0.7
RPA1-201ENST00000254719 FOXN1O15353 648 aa10.71□□□□□ -0.7
RPA1-201ENST00000254719 FGRP09769 529 aa10.71□□□□□ -0.7
RPA1-201ENST00000254719 CCZ1BP86790 482 aa10.71□□□□□ -0.7
RPA1-201ENST00000254719 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.7
RPA1-201ENST00000254719 GRIK5Q16478 980 aa10.71□□□□□ -0.7
RPA1-201ENST00000254719 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.7
RPA1-201ENST00000254719 MYL10Q9BUA6 226 aa10.71□□□□□ -0.7
RPA1-201ENST00000254719 MKRN1Q9UHC7 482 aaKnown RBP10.71□□□□□ -0.7
RPA1-201ENST00000254719 U2AF2P26368 475 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPA1-201ENST00000254719 SAFBQ15424 915 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPA1-201ENST00000254719 ZSCAN25Q6NSZ9 544 aa10.7□□□□□ -0.7
RPA1-201ENST00000254719 APTXQ7Z2E3 356 aaKnown RBP10.7□□□□□ -0.7
RPA1-201ENST00000254719 SPC24Q8NBT2 197 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms