RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 NAP1L1P55209 391 aaKnown RBP18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 GDAP1L1Q96MZ0 367 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 POTEB2H3BUK9 544 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 YEATS4O95619 227 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 CEP112Q8N8E3 955 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 PHKBQ93100 1093 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 RTEL1Q9NZ71 1219 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 KCNH3Q9ULD8 1083 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 GIGYF1O75420 1035 aaPredicted RBP18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 PLA2G4AP47712 749 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 DHX58Q96C10 678 aa18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.15■□□□□ 0.5
SLC6A8-201ENST00000253122 TNS3Q68CZ2 1445 aa18.14■□□□□ 0.5
SLC6A8-201ENST00000253122 TMEM232C9JQI7 657 aa18.14■□□□□ 0.5
SLC6A8-201ENST00000253122 CTR9Q6PD62 1173 aa18.14■□□□□ 0.5
SLC6A8-201ENST00000253122 FMR1NBQ8N0W7 255 aaPredicted RBP18.14■□□□□ 0.5
SLC6A8-201ENST00000253122 MICALL1Q8N3F8 863 aa18.14■□□□□ 0.5
SLC6A8-201ENST00000253122 ZNF446Q9NWS9 450 aa18.14■□□□□ 0.5
SLC6A8-201ENST00000253122 TRIM66O15016 1216 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 HOXB7P09629 217 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 LONRF3Q496Y0 759 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 CCDC148Q8NFR7 591 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 ADAM21Q9UKJ8 722 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 PHLPP2Q6ZVD8 1323 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 MYO1CO00159 1063 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 N4BP3O15049 544 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 KIAA1328Q86T90 577 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.14■□□□□ 0.497e-18■■■□□ 14.9
SLC6A8-201ENST00000253122 SPATA31A3Q5VYP0 1347 aa18.14■□□□□ 0.49
SLC6A8-201ENST00000253122 RNF113AO15541 343 aaKnown RBP18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 GCKRQ14397 625 aa18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 ZBTB3Q9H5J0 574 aa18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 AKR1B15C9JRZ8 316 aaPredicted RBP18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 CC2D1AQ6P1N0 951 aaPredicted RBP18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 RBM43Q6ZSC3 357 aaKnown RBP18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 DRC1Q96MC2 740 aa18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 TBC1D2BQ9UPU7 963 aa18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 IFIT3O14879 490 aaKnown RBP18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 SPECC1LQ69YQ0 1117 aa18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 FBXO18Q8NFZ0 1043 aa18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 RRP15Q9Y3B9 282 aaKnown RBP18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 PCDHA5Q9Y5H7 936 aa18.13■□□□□ 0.49
SLC6A8-201ENST00000253122 A0A1W2PQ27 194 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 A0A1W2PQ64 194 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 A0A1W2PQD8 194 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 HSPD1P10809 573 aaKnown RBP18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 SART3Q15020 963 aaKnown RBP18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 DPF2Q92785 391 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 CAPZA3Q96KX2 299 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 GUCA1BQ9UMX6 200 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 CARMIL3Q8ND23 1372 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 POLR2DO15514 142 aaKnown RBP18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 CMA1P23946 247 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 EVA1CP58658 441 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 TMEM67Q5HYA8 995 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 IGSF22Q8N9C0 903 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 PLEKHA4Q9H4M7 779 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 SLC12A7Q9Y666 1083 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 ADD1P35611 737 aaKnown RBP18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 WWC2Q6AWC2 1192 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 VPS37DQ86XT2 251 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
SLC6A8-201ENST00000253122 H2AFXP16104 143 aaPredicted RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 SSRP1Q08945 709 aaKnown RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 NBPF11Q86T75 865 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 RABGGTAQ92696 567 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 ZBTB43O43298 467 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 TADA3O75528 432 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 PPARDQ03181 441 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 NUTM2AQ8IVF1 878 aaPredicted RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 NFATC2IPQ8NCF5 419 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 GOLGA5Q8TBA6 731 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 ZNF274Q96GC6 653 aaPredicted RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 ZNF594Q96JF6 807 aaPredicted RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 WDR24Q96S15 920 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 ERBB3P21860 1342 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 A0A1B0GUL7 405 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 CCT6AP40227 531 aaKnown RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 MNAT1P51948 309 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 CABP4P57796 275 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 DNAJC21Q5F1R6 531 aaKnown RBP18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 AIFM3Q96NN9 605 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 CNNM1Q9NRU3 951 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 HELLSQ9NRZ9 838 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 AXIN2Q9Y2T1 843 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 NFAT5O94916 1531 aa18.11■□□□□ 0.49
SLC6A8-201ENST00000253122 TXLNAP40222 546 aa18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 MATR3P43243 847 aaKnown RBP eCLIP18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 KRT40Q6A162 431 aa18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 XBP1P17861 261 aa18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 MAP9Q49MG5 647 aa18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 FEZ2Q9UHY8 353 aaPredicted RBP18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 FAN1Q9Y2M0 1017 aa18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 NEURL1BA8MQ27 555 aa18.1■□□□□ 0.49
SLC6A8-201ENST00000253122 ACTN2P35609 894 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms