RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 IL1R1P14778 569 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 FGD1P98174 961 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 MECOMQ03112 1051 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 SCRN1Q12765 414 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 MB21D2Q8IYB1 491 aaPredicted RBP27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 SNED1Q8TER0 1413 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 EPB41L4AQ9HCS5 686 aaPredicted RBP27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 FBXL16Q8N461 479 aa27.57■■■□□ 2
SYNGR3-201ENST00000248121 JAK2O60674 1132 aa27.56■■■□□ 2
SYNGR3-201ENST00000248121 PFKFB2O60825 505 aa27.56■■■□□ 2
SYNGR3-201ENST00000248121 C7orf43Q8WVR3 580 aa27.56■■■□□ 2
SYNGR3-201ENST00000248121 KCNA3P22001 575 aa27.56■■■□□ 2
SYNGR3-201ENST00000248121 GPHNQ9NQX3 736 aaPredicted RBP27.56■■■□□ 2
SYNGR3-201ENST00000248121 BAZ2AQ9UIF9 1905 aaKnown RBP27.55■■■□□ 2
SYNGR3-201ENST00000248121 APPP05067 770 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 DYNLL1P63167 89 aaKnown RBP27.55■■■□□ 2
SYNGR3-201ENST00000248121 TBC1D10CQ8IV04 446 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 NKX2-3Q8TAU0 364 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 CNKSR1Q969H4 720 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 ZBTB22O15209 634 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 DPEP1P16444 411 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 ANTXR2P58335 489 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 ALX1Q15699 326 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 LARP1BQ659C4 914 aaKnown RBP27.55■■■□□ 2
SYNGR3-201ENST00000248121 NAA16Q6N069 864 aaPredicted RBP27.55■■■□□ 2
SYNGR3-201ENST00000248121 GDPD2Q9HCC8 539 aa27.55■■■□□ 2
SYNGR3-201ENST00000248121 MYH2Q9UKX2 1941 aa27.54■■■□□ 2
SYNGR3-201ENST00000248121 DOK7Q18PE1 504 aa27.54■■■□□ 2
SYNGR3-201ENST00000248121 SALL1Q9NSC2 1324 aa27.54■■■□□ 2
SYNGR3-201ENST00000248121 PATL2C9JE40 543 aaKnown RBP27.53■■■□□ 2
SYNGR3-201ENST00000248121 NCOA7Q8NI08 942 aa27.53■■■□□ 2
SYNGR3-201ENST00000248121 RIOK1Q9BRS2 568 aaKnown RBP27.53■■■□□ 2
SYNGR3-201ENST00000248121 MTFR1LQ9H019 292 aa27.53■■■□□ 2
SYNGR3-201ENST00000248121 SCN9AQ15858 1988 aa27.53■■■□□ 2
SYNGR3-201ENST00000248121 ZMYM6O95789 1325 aa27.53■■■□□ 2
SYNGR3-201ENST00000248121 EVCP57679 992 aa27.53■■■□□ 2
SYNGR3-201ENST00000248121 VPS37CA5D8V6 355 aaPredicted RBP27.52■■■□□ 2
SYNGR3-201ENST00000248121 GSG1L2A8MUP6 293 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 CDC37L1Q7L3B6 337 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 IFNL3Q8IZI9 196 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 ZNF646O15015 1829 aaPredicted RBP27.52■■■□□ 2
SYNGR3-201ENST00000248121 PRC1O43663 620 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 C21orf2O43822 256 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 CTDNEP1O95476 244 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 PDIA3P30101 505 aaKnown RBP27.52■■■□□ 2
SYNGR3-201ENST00000248121 MCM5P33992 734 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 SMARCC2Q8TAQ2 1214 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 WDR66Q8TBY9 1149 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 SDR42E1Q8WUS8 393 aa27.52■■■□□ 2
SYNGR3-201ENST00000248121 BRCA1P38398 1863 aaKnown RBP27.51■■■□□ 2
SYNGR3-201ENST00000248121 ZNF274Q96GC6 653 aaPredicted RBP27.51■■□□□ 1.99
SYNGR3-201ENST00000248121 ZC3H12CQ9C0D7 883 aaKnown RBP27.51■■□□□ 1.99
SYNGR3-201ENST00000248121 CNPY2Q9Y2B0 182 aa27.51■■□□□ 1.99
SYNGR3-201ENST00000248121 MAGEB6P1A0A0J9YX57 407 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 GOLGA6L3A6NEY3 463 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 PDCP20941 246 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 DIXDC1Q155Q3 683 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 USP48Q86UV5 1035 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 SLC4A4Q9Y6R1 1079 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 NCLP19338 710 aaKnown RBP27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 CAVIN1Q6NZI2 390 aaKnown RBP27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 GAS2L3Q86XJ1 694 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 TMEM87AQ8NBN3 555 aa27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 NSUN7Q8NE18 718 aaKnown RBP27.5■■□□□ 1.99
SYNGR3-201ENST00000248121 ADAMTSL1Q8N6G6 1762 aa27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 LDHBP07195 334 aaKnown RBP27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 CCT2P78371 535 aaKnown RBP27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 RALYLQ86SE5 291 aaKnown RBP27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 LLPHQ9BRT6 129 aaKnown RBP27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 TMX4Q9H1E5 349 aaPredicted RBP27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 DBNDD1Q9H9R9 158 aa27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 AATFQ9NY61 560 aaKnown RBP eCLIP27.49■■□□□ 1.99
SYNGR3-201ENST00000248121 GTF2IP78347 998 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 DZIP1Q86YF9 867 aaKnown RBP27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 MXD3Q9BW11 206 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 COA1Q9GZY4 146 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 NCOA5Q9HCD5 579 aaKnown RBP27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 KCNQ5Q9NR82 932 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 TACC3Q9Y6A5 838 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 WDR19Q8NEZ3 1342 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 PDIA4P13667 645 aaKnown RBP27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 SGIP1Q9BQI5 828 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 BRPF3Q9ULD4 1205 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 CDK5RAP2Q96SN8 1893 aa27.48■■□□□ 1.99
SYNGR3-201ENST00000248121 SMIM22K7EJ46 135 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 GADD45BO75293 160 aaPredicted RBP27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 MFSD14BQ5SR56 506 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 CYB5R4Q7L1T6 521 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 DDX11Q96FC9 970 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 NAPBQ9H115 298 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 RBM27Q9P2N5 1060 aaKnown RBP27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 ATP6V1DQ9Y5K8 247 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 TTLL6Q8N841 843 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 INCENPQ9NQS7 918 aa27.47■■□□□ 1.99
SYNGR3-201ENST00000248121 NEDD4P46934 1319 aa27.46■■□□□ 1.99
SYNGR3-201ENST00000248121 TIAM2Q8IVF5 1701 aa27.46■■□□□ 1.99
SYNGR3-201ENST00000248121 GNAT2P19087 354 aa27.46■■□□□ 1.99
SYNGR3-201ENST00000248121 DNM1Q05193 864 aaKnown RBP27.46■■□□□ 1.99
SYNGR3-201ENST00000248121 FBXW7Q969H0 707 aa27.46■■□□□ 1.99
SYNGR3-201ENST00000248121 FERMT3Q86UX7 667 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms