RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 VPS53Q5VIR6 699 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 TRPM4Q8TD43 1214 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 SH3RF3Q8TEJ3 882 aaPredicted RBP24.24■■□□□ 1.47
SNRPA-201ENST00000243563 MRIQ9BWK5 157 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 MYOZ2Q9NPC6 264 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 NAV1Q8NEY1 1877 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 DDX60LQ5H9U9 1706 aaKnown RBP24.24■■□□□ 1.47
SNRPA-201ENST00000243563 PRKAB2O43741 272 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 IGSF3O75054 1194 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 LDHCP07864 332 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 TBC1D10BQ4KMP7 808 aaPredicted RBP24.24■■□□□ 1.47
SNRPA-201ENST00000243563 RBM26Q5T8P6 1007 aaKnown RBP24.24■■□□□ 1.47
SNRPA-201ENST00000243563 DPY19L2Q6NUT2 758 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 L3MBTL3Q96JM7 780 aaPredicted RBP24.24■■□□□ 1.47
SNRPA-201ENST00000243563 HDAC9Q9UKV0 1011 aa24.24■■□□□ 1.47
SNRPA-201ENST00000243563 ASTN2O75129 1339 aaPredicted RBP24.24■■□□□ 1.47
SNRPA-201ENST00000243563 NBPF9Q3BBW0 867 aa24.23■■□□□ 1.47
SNRPA-201ENST00000243563 OGFOD1Q8N543 542 aa24.23■■□□□ 1.47
SNRPA-201ENST00000243563 STRBPQ96SI9 672 aaKnown RBP24.23■■□□□ 1.47
SNRPA-201ENST00000243563 CCDC171Q6TFL3 1326 aa24.23■■□□□ 1.47
SNRPA-201ENST00000243563 SPDYE2BA6NHP3 402 aa24.22■■□□□ 1.47
SNRPA-201ENST00000243563 SPDYE6P0CI01 402 aa24.22■■□□□ 1.47
SNRPA-201ENST00000243563 PPP4CP60510 307 aa24.22■■□□□ 1.47
SNRPA-201ENST00000243563 CDC42EP5Q6NZY7 148 aa24.22■■□□□ 1.47
SNRPA-201ENST00000243563 AIDAQ96BJ3 306 aa24.22■■□□□ 1.47
SNRPA-201ENST00000243563 HIRAP54198 1017 aaPredicted RBP24.21■■□□□ 1.47
SNRPA-201ENST00000243563 SLF2Q8IX21 1173 aa24.21■■□□□ 1.47
SNRPA-201ENST00000243563 MTMR14Q8NCE2 650 aa24.21■■□□□ 1.47
SNRPA-201ENST00000243563 TDRD3Q9H7E2 651 aaKnown RBP24.21■■□□□ 1.47
SNRPA-201ENST00000243563 RAD50Q92878 1312 aa24.21■■□□□ 1.47
SNRPA-201ENST00000243563 CACNB3P54284 484 aa24.21■■□□□ 1.47
SNRPA-201ENST00000243563 PTH1RQ03431 593 aa24.21■■□□□ 1.47
SNRPA-201ENST00000243563 DLGAP5Q15398 846 aa24.21■■□□□ 1.47
SNRPA-201ENST00000243563 TMED8Q6PL24 325 aaPredicted RBP24.21■■□□□ 1.47
SNRPA-201ENST00000243563 POLR2AP24928 1970 aaKnown RBP24.2■■□□□ 1.46
SNRPA-201ENST00000243563 MYH1P12882 1939 aa24.2■■□□□ 1.46
SNRPA-201ENST00000243563 WNT10BO00744 389 aa24.2■■□□□ 1.46
SNRPA-201ENST00000243563 KIF4BQ2VIQ3 1234 aa24.2■■□□□ 1.46
SNRPA-201ENST00000243563 CASC1Q6TDU7 716 aa24.2■■□□□ 1.46
SNRPA-201ENST00000243563 SDR42E1Q8WUS8 393 aa24.2■■□□□ 1.46
SNRPA-201ENST00000243563 RUFY2Q8WXA3 655 aa24.2■■□□□ 1.46
SNRPA-201ENST00000243563 LSG1Q9H089 658 aaKnown RBP24.19■■□□□ 1.46
SNRPA-201ENST00000243563 EPB41L4AQ9HCS5 686 aaPredicted RBP24.19■■□□□ 1.46
SNRPA-201ENST00000243563 USP40Q9NVE5 1235 aa24.19■■□□□ 1.46
SNRPA-201ENST00000243563 CLRN2A0PK11 232 aa24.18■■□□□ 1.46
SNRPA-201ENST00000243563 H7C1D1 291 aa24.18■■□□□ 1.46
SNRPA-201ENST00000243563 DDX4Q9NQI0 724 aaKnown RBP24.18■■□□□ 1.46
SNRPA-201ENST00000243563 SCAF8Q9UPN6 1271 aaKnown RBP24.18■■□□□ 1.46
SNRPA-201ENST00000243563 LAMB1P07942 1786 aa24.18■■□□□ 1.46
SNRPA-201ENST00000243563 GSG1L2A8MUP6 293 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 WDHD1O75717 1129 aaPredicted RBP24.17■■□□□ 1.46
SNRPA-201ENST00000243563 BAG3O95817 575 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 NFIAQ12857 509 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 BACH2Q9BYV9 841 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 SLC4A4Q9Y6R1 1079 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 LAMA4Q16363 1823 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 HSPD1P10809 573 aaKnown RBP24.17■■□□□ 1.46
SNRPA-201ENST00000243563 LMOD1P29536 600 aaPredicted RBP24.17■■□□□ 1.46
SNRPA-201ENST00000243563 TEX11Q8IYF3 940 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 ZNF526Q8TF50 670 aaPredicted RBP24.17■■□□□ 1.46
SNRPA-201ENST00000243563 ZNF70Q9UC06 446 aaPredicted RBP24.17■■□□□ 1.46
SNRPA-201ENST00000243563 HACL1Q9UJ83 578 aa24.17■■□□□ 1.46
SNRPA-201ENST00000243563 SIPA1L1O43166 1804 aa24.16■■□□□ 1.46
SNRPA-201ENST00000243563 MFAP1P55081 439 aaKnown RBP24.16■■□□□ 1.46
SNRPA-201ENST00000243563 EVX2Q03828 476 aa24.16■■□□□ 1.46
SNRPA-201ENST00000243563 SPDYE2Q495Y8 402 aa24.16■■□□□ 1.46
SNRPA-201ENST00000243563 TGFBRAP1Q8WUH2 860 aa24.16■■□□□ 1.46
SNRPA-201ENST00000243563 NOL10Q9BSC4 688 aaKnown RBP24.16■■□□□ 1.46
SNRPA-201ENST00000243563 ANO2Q9NQ90 1003 aa24.16■■□□□ 1.46
SNRPA-201ENST00000243563 SMIM22K7EJ46 135 aa24.15■■□□□ 1.46
SNRPA-201ENST00000243563 ADARB2Q9NS39 739 aaKnown RBP24.15■■□□□ 1.46
SNRPA-201ENST00000243563 EPHX2P34913 555 aa24.14■■□□□ 1.46
SNRPA-201ENST00000243563 MAPKAPK5Q8IW41 473 aa24.14■■□□□ 1.46
SNRPA-201ENST00000243563 ZFPM1Q8IX07 1006 aa24.14■■□□□ 1.46
SNRPA-201ENST00000243563 CRNKL1Q9BZJ0 848 aaKnown RBP24.14■■□□□ 1.46
SNRPA-201ENST00000243563 TAF1DQ9H5J8 278 aaPredicted RBP24.14■■□□□ 1.46
SNRPA-201ENST00000243563 RRAGCQ9HB90 399 aa24.14■■□□□ 1.46
SNRPA-201ENST00000243563 NMRK2Q9NPI5 230 aa24.14■■□□□ 1.46
SNRPA-201ENST00000243563 FAM198AQ9UFP1 575 aa24.14■■□□□ 1.46
SNRPA-201ENST00000243563 MKRN1Q9UHC7 482 aaKnown RBP24.14■■□□□ 1.46
SNRPA-201ENST00000243563 MMP14P50281 582 aa24.13■■□□□ 1.45
SNRPA-201ENST00000243563 CNTNAP1P78357 1384 aa24.13■■□□□ 1.45
SNRPA-201ENST00000243563 FLT1P17948 1338 aa24.13■■□□□ 1.45
SNRPA-201ENST00000243563 PICALMQ13492 652 aa24.13■■□□□ 1.45
SNRPA-201ENST00000243563 DCP1AQ9NPI6 582 aaPredicted RBP24.13■■□□□ 1.45
SNRPA-201ENST00000243563 PATL2C9JE40 543 aaKnown RBP24.12■■□□□ 1.45
SNRPA-201ENST00000243563 POTEIP0CG38 1075 aa24.12■■□□□ 1.45
SNRPA-201ENST00000243563 POTEJP0CG39 1038 aa24.12■■□□□ 1.45
SNRPA-201ENST00000243563 PLCG2P16885 1265 aa24.12■■□□□ 1.45
SNRPA-201ENST00000243563 SLC4A8Q2Y0W8 1093 aa24.12■■□□□ 1.45
SNRPA-201ENST00000243563 IFNL3Q8IZI9 196 aa24.12■■□□□ 1.45
SNRPA-201ENST00000243563 CYP2D7A0A087X1C5 515 aa24.11■■□□□ 1.45
SNRPA-201ENST00000243563 TCP10L2B9ZVM9 353 aa24.11■■□□□ 1.45
SNRPA-201ENST00000243563 VEZTQ9HBM0 779 aa24.11■■□□□ 1.45
SNRPA-201ENST00000243563 APPP05067 770 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 CYP2D6P10635 497 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 USP5P45974 858 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 TCP10Q12799 353 aa24.1■■□□□ 1.45
SNRPA-201ENST00000243563 ANGEL2Q5VTE6 544 aaKnown RBP24.1■■□□□ 1.45
SNRPA-201ENST00000243563 CDAN1Q8IWY9 1227 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms