RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TMEM87BQ96K49 555 aa21.7■■□□□ 1.06
HOXC11-201ENST00000243082 SCAND2PQ9GZW5 306 aaPredicted RBP21.7■■□□□ 1.06
HOXC11-201ENST00000243082 TIAM2Q8IVF5 1701 aa21.7■■□□□ 1.06
HOXC11-201ENST00000243082 DHX16O60231 1041 aaKnown RBP21.69■■□□□ 1.06
HOXC11-201ENST00000243082 CCDC183Q5T5S1 534 aa21.69■■□□□ 1.06
HOXC11-201ENST00000243082 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
HOXC11-201ENST00000243082 RAB11FIP4Q86YS3 637 aa21.69■■□□□ 1.06
HOXC11-201ENST00000243082 FOSBP53539 338 aa21.68■■□□□ 1.06
HOXC11-201ENST00000243082 PROM2Q8N271 834 aa21.68■■□□□ 1.06
HOXC11-201ENST00000243082 STAG1Q8WVM7 1258 aa21.68■■□□□ 1.06
HOXC11-201ENST00000243082 CNNM2Q9H8M5 875 aa21.68■■□□□ 1.06
HOXC11-201ENST00000243082 SENP2Q9HC62 589 aa21.68■■□□□ 1.06
HOXC11-201ENST00000243082 ZSWIM5Q9P217 1185 aa21.68■■□□□ 1.06
HOXC11-201ENST00000243082 ZBTB22O15209 634 aa21.68■■□□□ 1.06
HOXC11-201ENST00000243082 KDM4AO75164 1064 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 MFSD6Q6ZSS7 791 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 SDR42E1Q8WUS8 393 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 LEO1Q8WVC0 666 aaPredicted RBP21.67■■□□□ 1.06
HOXC11-201ENST00000243082 NSUN4Q96CB9 384 aaKnown RBP21.67■■□□□ 1.06
HOXC11-201ENST00000243082 KRT23Q9C075 422 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 LY9Q9HBG7 655 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 SERPINB2P05120 415 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 ADD1P35611 737 aaKnown RBP21.67■■□□□ 1.06
HOXC11-201ENST00000243082 SGMS1Q86VZ5 419 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 SPATA32Q96LK8 384 aa21.67■■□□□ 1.06
HOXC11-201ENST00000243082 CHD4Q14839 1912 aa21.66■■□□□ 1.06
HOXC11-201ENST00000243082 DYNLL1P63167 89 aaKnown RBP21.66■■□□□ 1.06
HOXC11-201ENST00000243082 CRY2Q49AN0 593 aa21.66■■□□□ 1.06
HOXC11-201ENST00000243082 APOA5Q6Q788 366 aa21.66■■□□□ 1.06
HOXC11-201ENST00000243082 LIFRP42702 1097 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 MECOMQ03112 1051 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 PPARAQ07869 468 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 LEMD3Q9Y2U8 911 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 CPLX1O14810 134 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 TXNRD1Q16881 649 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 TMEM67Q5HYA8 995 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 ANKIB1Q9P2G1 1089 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 ORC3Q9UBD5 711 aaPredicted RBP21.65■■□□□ 1.06
HOXC11-201ENST00000243082 ANAPC4Q9UJX5 808 aa21.65■■□□□ 1.06
HOXC11-201ENST00000243082 METAP2P50579 478 aaKnown RBP eCLIP21.64■■□□□ 1.05
HOXC11-201ENST00000243082 GUCY1B3Q02153 619 aa21.64■■□□□ 1.05
HOXC11-201ENST00000243082 CHAF1AQ13111 956 aaPredicted RBP21.64■■□□□ 1.05
HOXC11-201ENST00000243082 MYH13Q9UKX3 1938 aa21.64■■□□□ 1.05
HOXC11-201ENST00000243082 IFIT3O14879 490 aaKnown RBP21.63■■□□□ 1.05
HOXC11-201ENST00000243082 LETM1O95202 739 aaPredicted RBP21.63■■□□□ 1.05
HOXC11-201ENST00000243082 ST5P78524 1137 aa21.63■■□□□ 1.05
HOXC11-201ENST00000243082 TSPY26PQ9H489 355 aa21.63■■□□□ 1.05
HOXC11-201ENST00000243082 PRDX5P30044 214 aa21.63■■□□□ 1.05
HOXC11-201ENST00000243082 DDR1Q08345 913 aa21.63■■□□□ 1.05
HOXC11-201ENST00000243082 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
HOXC11-201ENST00000243082 RPGRQ92834 1020 aaKnown RBP21.63■■□□□ 1.05
HOXC11-201ENST00000243082 BRIP1Q9BX63 1249 aa21.63■■□□□ 1.05
HOXC11-201ENST00000243082 CFAP45Q9UL16 551 aa21.63■■□□□ 1.05
HOXC11-201ENST00000243082 XDHP47989 1333 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 RXRAP19793 462 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 CDC27P30260 824 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 RRP12Q5JTH9 1297 aaKnown RBP21.62■■□□□ 1.05
HOXC11-201ENST00000243082 RNF41Q9H4P4 317 aaPredicted RBP21.62■■□□□ 1.05
HOXC11-201ENST00000243082 MINDY4BA8MYZ0 360 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 ZBTB43O43298 467 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 OTUD7BQ6GQQ9 843 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 NFXL1Q6ZNB6 911 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 STK11IPQ8N1F8 1099 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 PGBD1Q96JS3 809 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 C8orf76Q96K31 380 aa21.62■■□□□ 1.05
HOXC11-201ENST00000243082 FAM217BQ9NTX9 383 aaPredicted RBP21.62■■□□□ 1.05
HOXC11-201ENST00000243082 SMIM22K7EJ46 135 aa21.61■■□□□ 1.05
HOXC11-201ENST00000243082 POLRMTO00411 1230 aaKnown RBP21.61■■□□□ 1.05
HOXC11-201ENST00000243082 LIG1P18858 919 aa21.61■■□□□ 1.05
HOXC11-201ENST00000243082 MICU3Q86XE3 530 aa21.61■■□□□ 1.05
HOXC11-201ENST00000243082 FBXO18Q8NFZ0 1043 aa21.61■■□□□ 1.05
HOXC11-201ENST00000243082 MTA3Q9BTC8 594 aa21.61■■□□□ 1.05
HOXC11-201ENST00000243082 TOMM22Q9NS69 142 aa21.61■■□□□ 1.05
HOXC11-201ENST00000243082 GIMAP6Q6P9H5 292 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 C15orf52Q6ZUT6 534 aaKnown RBP21.6■■□□□ 1.05
HOXC11-201ENST00000243082 JAG2Q9Y219 1238 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 MYH15Q9Y2K3 1946 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 RBM6P78332 1123 aaKnown RBP21.6■■□□□ 1.05
HOXC11-201ENST00000243082 GPSM2P81274 684 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 NTRK3Q16288 839 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 ATL3Q6DD88 541 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 TMED8Q6PL24 325 aaPredicted RBP21.6■■□□□ 1.05
HOXC11-201ENST00000243082 TDRD7Q8NHU6 1098 aaKnown RBP21.6■■□□□ 1.05
HOXC11-201ENST00000243082 PPP1R9BQ96SB3 815 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 MYL10Q9BUA6 226 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 RCOR1Q9UKL0 485 aa21.6■■□□□ 1.05
HOXC11-201ENST00000243082 KLHL34Q8N239 644 aa21.59■■□□□ 1.05
HOXC11-201ENST00000243082 RBM17Q96I25 401 aaKnown RBP21.59■■□□□ 1.05
HOXC11-201ENST00000243082 ZKSCAN3Q9BRR0 538 aa21.59■■□□□ 1.05
HOXC11-201ENST00000243082 SLC12A7Q9Y666 1083 aa21.59■■□□□ 1.05
HOXC11-201ENST00000243082 GOLGA6L4A6NEF3 574 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 CCDC69A6NI79 296 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 GOLGA8AA7E2F4 631 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 CDKL5O76039 1030 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 CCDC173Q0VFZ6 552 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 CTR9Q6PD62 1173 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 CCDC144CPQ8IYA2 1237 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 RGS22Q8NE09 1264 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 USP28Q96RU2 1077 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 FTOQ9C0B1 505 aaKnown RBP eCLIP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms