RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 CYP26C1Q6V0L0 522 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 ZNF354CQ86Y25 554 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 DDX21Q9NR30 783 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPS1-201ENST00000233072 DNAI1Q9UI46 699 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 PDE8AO60658 829 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 CUTAO60888 179 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 NOL3O60936 208 aaKnown RBP8.1□□□□□ -1.11
CPS1-201ENST00000233072 CHMLP26374 656 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 CLCN1P35523 988 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 CALCOCO2Q13137 446 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 SETDB1Q15047 1291 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 CCDC6Q16204 474 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 AFAP1L2Q8N4X5 818 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 OTUD6BQ8N6M0 293 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 PANK2Q9BZ23 570 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 DNAJC25Q9H1X3 360 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 TXNDC16Q9P2K2 825 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 IMPACTQ9P2X3 320 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 LUC7L2Q9Y383 392 aaKnown RBP8.1□□□□□ -1.11
CPS1-201ENST00000233072 ATP6V0A2Q9Y487 856 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 PPP1R7Q15435 360 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 HDXQ7Z353 690 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 KRT25Q7Z3Z0 450 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 MAIP1Q8WWC4 291 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 VAMP4O75379 141 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 CNGA1P29973 690 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 MCM7P33993 719 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 CEBPAP49715 358 aaPredicted RBP8.1□□□□□ -1.11
CPS1-201ENST00000233072 SEPT6Q14141 434 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 MAP7Q14244 749 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 CHRNA2Q15822 529 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 BRDTQ58F21 947 aaPredicted RBP8.1□□□□□ -1.11
CPS1-201ENST00000233072 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
CPS1-201ENST00000233072 SAMD15Q9P1V8 674 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 DNM1Q05193 864 aaKnown RBP8.09□□□□□ -1.11
CPS1-201ENST00000233072 TRAPPC3LQ5T215 181 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 UBL4BQ8N7F7 174 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 IFT74Q96LB3 600 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 IBTKQ9P2D0 1353 aaPredicted RBP8.09□□□□□ -1.11
CPS1-201ENST00000233072 YWHAEP62258 255 aaKnown RBP8.09□□□□□ -1.11
CPS1-201ENST00000233072 C16orf71Q8IYS4 520 aaPredicted RBP8.09□□□□□ -1.11
CPS1-201ENST00000233072 FAM169AQ9Y6X4 670 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 ZFYVE16Q7Z3T8 1539 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 CLASP1Q7Z460 1538 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 APOBRQ0VD83 1088 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 STRN3Q13033 797 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 ASIC2Q16515 512 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 TAOK1Q7L7X3 1001 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 CCDC186Q7Z3E2 898 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 RAB11FIP4Q86YS3 637 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 SYCE1Q8N0S2 351 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 BICC1Q9H694 974 aaKnown RBP8.09□□□□□ -1.11
CPS1-201ENST00000233072 ZBTB40Q9NUA8 1239 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 ODF2LQ9ULJ1 636 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 TBX22Q9Y458 520 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 KIAA0232Q92628 1395 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 EYA2O00167 538 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 GNA14O95837 355 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 MARCKSP29966 332 aaPredicted RBP8.09□□□□□ -1.11
CPS1-201ENST00000233072 CCDC63Q8NA47 563 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 SELENOSQ9BQE4 189 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 PICK1Q9NRD5 415 aa8.09□□□□□ -1.11
CPS1-201ENST00000233072 BLMP54132 1417 aaPredicted RBP8.09□□□□□ -1.11
CPS1-201ENST00000233072 TMEM110-MUSTN1A8MSY1 372 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 CIB2O75838 187 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 MAP3K9P80192 1104 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 TNNI3KQ59H18 835 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 TSHZ3Q63HK5 1081 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 PLEKHM2Q8IWE5 1019 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 TRIM7Q9C029 511 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 CTNND2Q9UQB3 1225 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 FPGT-TNNI3KV9GXZ4 949 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 KDM5DQ9BY66 1539 aa8.09□□□□□ -1.12
CPS1-201ENST00000233072 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 C8orf34Q49A92 452 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 FYB2Q5VWT5 728 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 ISM2Q6H9L7 571 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 NOX5Q96PH1 765 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 LARP6Q9BRS8 491 aaKnown RBP8.08□□□□□ -1.12
CPS1-201ENST00000233072 USP26Q9BXU7 913 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 FAM184BQ9ULE4 1060 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 GIGYF1O75420 1035 aaPredicted RBP8.08□□□□□ -1.12
CPS1-201ENST00000233072 MYCNP04198 464 aaPredicted RBP8.08□□□□□ -1.12
CPS1-201ENST00000233072 PLCB1Q9NQ66 1216 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 NEO1Q92859 1461 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 CCT6AP40227 531 aaKnown RBP8.08□□□□□ -1.12
CPS1-201ENST00000233072 CFAP157Q5JU67 520 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 CNBD1Q8NA66 436 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 FNBP1Q96RU3 617 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 TCHPQ9BT92 498 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 CLSTN2Q9H4D0 955 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 VEZTQ9HBM0 779 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 GGA1Q9UJY5 639 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 SHROOM2Q13796 1616 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 GMNNO75496 209 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 MBD4O95243 580 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 ADCY7P51828 1080 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 TEX11Q8IYF3 940 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 FAM76AQ8TAV0 307 aa8.08□□□□□ -1.12
CPS1-201ENST00000233072 APPBP2Q92624 585 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms